Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1284 ATGGGttggttttcaaagatttgCACTATTGTGATCTCTTTCGTTGGTTTCATAATTTGTAACGGCTTTGCTCTCTCAATCAGTTTATACGATCTGGAATGCGTATCAGAGCACGTTCTACATGATGGTGACACTGTTTCCGGGAATTTTGTAGTCATTGACTACGATATTTTCTGGAACTCTGACCATCCCGGAATTGATTTCACTGTAACATCCCCGGGAGGGAATTTGGTGTACTCGTTGAAGGGAACATCAGGGGAAAAATTTCAGTTCAAAGCCTCACAACATGGAATATATAAGTTTTGCTTTCACAACCCTGCTTCAACGCCAGAGACTGTGTCTTTCTACATTCACGTTGGCCATATCCCAAACGAACATGATTTAGCTAAAGATGAACATTTGGATCCCGTTAATGTGAAGATTGCTGAGTTGAGAGAGGCACTGGAATCTATTATAACAGAACAAAAGTACTTGAAAGCACGTGATGCTAGACATCGATACACAAACGAAAGTACCAGAAAACGTGTTGTCTTCTACACAATCTTAGAGTATATTCTGTTCGCTGCTACAAGTTTATTACAAGTGGTATACATTCGACGCCTCTTCAGCAAATCATTTGCTTACAACCGAGTGTAG 636 0.3947 MGWFSKICTIVISFVGFIICNGFALSISLYDLECVSEHVLHDGDTVSGNFVVIDYDIFWNSDHPGIDFTVTSPGGNLVYSLKGTSGEKFQFKASQHGIYKFCFHNPASTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESIITEQKYLKARDARHRYTNESTRKRVVFYTILEYILFAATSLLQVVYIRRLFSKSFAYNRV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1284 211 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 4 207 - -
Ssu4g1284 211 SMART EMP24_GP25L_2 24 203 IPR009038 -
Ssu4g1284 211 Pfam emp24/gp25L/p24 family/GOLD 31 202 IPR009038 -
Ssu4g1284 211 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 40 128 IPR036598 -
Ssu4g1284 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
Ssu4g1284 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 4 207 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1284 Ssu-Chr4 20946662 20947998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1284 K20347 - gmx:100789501 402.134