Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1212 ATGAACATCTTCACCAAGAAACCCACCGCCAAAGAGGCTCTTCGGGAGAGTAAACGAGAAATGGCAAACGCCACTAGAGGTGTAGAGAGGGAAATTGGAGCACTACAATTGGAAGAAAAGAAGCTCGTTGCTGAGATAAAGAGAACTGCTAAGACGGGAAATGAGGCAGCAACTAAGGTTCTCGCTCGCCAGTTGGTCAGGCTTAGGCAACAGATTGCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATAGCAACTCACACGCAGGCGATGCATGCCCATTCTTCTGTTGCTGTTGGCATGAAAGGTGCTACTAAGGCAATGGCAGCTATGAATAAGCAAATGGAGCCAGCAAAGCAGGCTAAAATTGTACAGGACTTCCAGAAACAATCAGCACAGATGGATATGACTACTGAAATGATGTCAGATGCCATAGATGATGCCTTGGATAATGATGAAGCTGAAGAGGAGACTGAAGAGCTGACAAATCAGGTGCTCGATGAAATTGGTGTAGATGTTGCCTCACAGTTATCAGCAGCTCCCAAAGGGAGAGTCGCAACAAAGAATACTGAAAATGTTGGCAGGTATTTTCTAACTGTCGCTTTtctgaagaatttaatttggatCCTTGTGTCTATttgcatgaataaattaaaatttctttag 669 0.423 MNIFTKKPTAKEALRESKREMANATRGVEREIGALQLEEKKLVAEIKRTAKTGNEAATKVLARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATKAMAAMNKQMEPAKQAKIVQDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVDVASQLSAAPKGRVATKNTENVGRYFLTVAFLKNLIWILVSICMNKLKFL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1212 222 MobiDBLite consensus disorder prediction 1 22 - -
Ssu4g1212 222 Gene3D - 4 181 - -
Ssu4g1212 222 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 198 IPR005024 GO:0007034
Ssu4g1212 222 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 198 - -
Ssu4g1212 222 Pfam Snf7 16 185 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1212 Ssu-Chr4 19232613 19235376 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1212 K12192 - gmx:100306343 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1212 4 19232613 19235376 Ssu4g1212 4 19232613 19235376 ECH