Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1207 atggAAGGGAGAGAGAGTTGTCACCCATTGCTGAGGGGAGgtaggaaaagagagaaaggttACAGCCATGGCTTATCCACCACTCAGATGCATGTCATGGCTTCGATCTGTGACACCCTCTTTCCTTCTCTGCCGCCATTGACCTCCCTCGACAAGAAAAACTCACAAGACCAACCTCTTTCAGCCTTCTACAATACCTCTGCTTCTCAAGTCCCTTTTCCCGATGAGGCTGCAGAGCTGTTGTTCAAGAGGGGTGTGCCAGAGGCGTTGTCTTTGGTTAGTTGGGTTCTGTGGATGCTGTCGTTCAGATTGGGGACACTGTTGCTTTGTGGGAGTCTTTGCTTGGACTGGAAGTGGCCTTTCATTCACAAGTTCTCTGAGATTTCCTTGGAGAACAGAGAAGAGATTCTCAGGAAATGGTCGAGGGAAAAGAGTTGGGTACCCCTGCGGGTAGTGTTTGTGCTCATCAAACTTGTTTTCTTCTATACTTTCTTCTCAAGGACCGATGTCAATGGTCATAATCCCGTATGGAAAGCAATTGGATACCAGGTGGACACCAGGGAAAAGTTGATACTAAAGGAGAGGCCTCTCCAAAAGGGATTAATAGAGACTATGTACGAAACTGATTCTGCTTTAATCCAATCCTTCACTGAAAAAGGCCTTGAAGTCACTGAAGATAAAAGGCAGAACCTATACAAGGTCAAATGTGATGTTGTCATTGTGGGGTCTGGTTGTGGTGGAGGAGTTGCAGCTGCAGTTCTTGCAAAATCTGGCCAGAAAGTAATCGTCCTAGAGAAAGGAGAGTATTTTGTTCCCCATGACTATTCTTCCCTGGAAGGTCCATCCATGAATGAGCTATACGAATCAGGTGGCATTATGCCAAGTCTTGATGGGAAGATGATGATCCTGGCTGGCTCAACAGTGGGTGGAGGCTCAGCTATAAACTGGTCTGCATGCATCAGAACACCTGATTCTGTTCTGAGGGAATGGTCTAGTAAATATAAAATCCCACTTTTTGCAAGCTCTGATTATCAATCTGCCATGGACTCAGTATGCAGAAGGATTGGTGTGACAGAGAAGTGCAAGAAGGAAAGCTTTCAGAATCAGATTCTTAGACAAGGATGCGAGAAAATTGGCTTGAAAGTGGAGTCGGTGGCTATAAATTCTTCAGCTGATCACTATTGTGGTTCATGCTGTTATGGTTGTAGAACAGGAGATAAGAAGGGCACTGACTCTACTTGGTTGGTTGATGCTGTAGGTAATGGTGCAGTGATCCTCACTGGATGTAAAGCTGAGAAATTCATACTAGAAGATGGAGAGGGtggaatgaagaaaaagaaatgcttAGGAGTGATTGCTGCAGCAACTTGGAGGAGTGAGGTAACAAAGAAAATCCAAATCGAATCCAAGGTAACTATCTCAGCATGTGGCTCTCTCTCCACTCCTCCTCTAATGATTTCTAGTGGACTGAAAAATCCAAACATTGGAAGGAATCTCCATCTCCATCCTGTTCAATTTGCATGGGGGTACTTCCCAGAAGACATGACAAACTTTAGTGGTACTAACTATGAGGGTGGAATCATAACCTCAATCCACAAGGTATTTGCAGAGGATTCCACCCCTCGAATCATTGTAGAAGCACCTGCTCTAGGACCAGGATCATTTTCAGCATTGGTTCCCTGGCTCTCAGGGCATGACATGAAAGACAGGATGATGAAGTATGCAAGAACTGCTAACCTTTTTGCATTGATAAGAGACCAGGGATCAGGAGAAGTGAAGGCTGAAGGGAGAGTGACTTACAGACTTGACCAAGCGGACAAAGAAAATCTTCGAGTTGGACTAAGGAAGGCCTTGAGGATTTTGGTTGCTGCAGGTGCTGTGGAAGTGGGCACATACAGGAGTGATGGCCAAAGAATCAAATGTAGGGGGATCAAGGAGGAAGATTTAGAAGAGTTTCTTGACACTGTCACTATAGTTGGGGGTCCAAGGTCCAGGAATGAACTCTGGACAGTATTTACTACTGCACATCAGATGACAAGTTGCAGAATGGGTGCCACTGAAGAAGAAGGTGCACTTGATGAGACTGGTGAGAGCTGGGAAGCAAAAGGCTTGTATGTGTGTGATGGGAGCGTTTTGCCCAGTGCAGTTGGTGTCAACCCCATGGTAACCATCCAGTCTACAGCATACTGTATTGCCAGTAAGATAGCAGAATCACTTAGCAAAgaaaagcaaagcaaagcatGA 2244 0.4425 MEGRESCHPLLRGGRKREKGYSHGLSTTQMHVMASICDTLFPSLPPLTSLDKKNSQDQPLSAFYNTSASQVPFPDEAAELLFKRGVPEALSLVSWVLWMLSFRLGTLLLCGSLCLDWKWPFIHKFSEISLENREEILRKWSREKSWVPLRVVFVLIKLVFFYTFFSRTDVNGHNPVWKAIGYQVDTREKLILKERPLQKGLIETMYETDSALIQSFTEKGLEVTEDKRQNLYKVKCDVVIVGSGCGGGVAAAVLAKSGQKVIVLEKGEYFVPHDYSSLEGPSMNELYESGGIMPSLDGKMMILAGSTVGGGSAINWSACIRTPDSVLREWSSKYKIPLFASSDYQSAMDSVCRRIGVTEKCKKESFQNQILRQGCEKIGLKVESVAINSSADHYCGSCCYGCRTGDKKGTDSTWLVDAVGNGAVILTGCKAEKFILEDGEGGMKKKKCLGVIAAATWRSEVTKKIQIESKVTISACGSLSTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTNFSGTNYEGGIITSIHKVFAEDSTPRIIVEAPALGPGSFSALVPWLSGHDMKDRMMKYARTANLFALIRDQGSGEVKAEGRVTYRLDQADKENLRVGLRKALRILVAAGAVEVGTYRSDGQRIKCRGIKEEDLEEFLDTVTIVGGPRSRNELWTVFTTAHQMTSCRMGATEEEGALDETGESWEAKGLYVCDGSVLPSAVGVNPMVTIQSTAYCIASKIAESLSKEKQSKA 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1207 747 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 4 743 - -
Ssu4g1207 747 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 4 743 - -
Ssu4g1207 747 MobiDBLite consensus disorder prediction 1 20 - -
Ssu4g1207 747 Gene3D - 221 534 IPR036188 -
Ssu4g1207 747 Pfam GMC oxidoreductase 237 504 IPR000172 GO:0016614|GO:0050660
Ssu4g1207 747 Gene3D - 588 739 IPR036188 -
Ssu4g1207 747 Pfam GMC oxidoreductase 597 730 IPR007867 GO:0016614
Ssu4g1207 747 PIRSF Lg_Ch_AO 11 745 IPR012400 GO:0046577
Ssu4g1207 747 SUPERFAMILY FAD/NAD(P)-binding domain 235 741 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1207 Ssu-Chr4 19162829 19166656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1207 4 744 Acyl Lipid Metabolism Gene Families AT4G28570 58.722 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1207 K17756 - gmx:100808951 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1207 4 19162829 19166656 Ssu4g1207 4 19162829 19166656 ECH