Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1202 atggagagTGGGAATGGGAAGAGAGCACAGGAAGAAGCAGGCCCTTCATCTGGGCTCTCTTCTGCTTCTGGGATTGATGGAAGCAAACAGGAAATGACTGAAAAAGCAAGTGATGCTTTTGATGATGGTagggaagaggaggaggaggaggaggaggaagaaggagGCATTGACGATAATAAAAATGGTGTCTTCGTTCCTGGGCCTCTTCTTTCTCTCAAGGAACAGATCGAACGGGACAAGGAGGACGAAAGCCTGAGGAGGTGGAAGGAGAAGCTGTTGGGTTGCTTGGAAAGTGATTTAGATGGTCAATTGGACCCTGAAGTGAAATTCCACTCCATAGGAATTCTCTCGGAGGATTTTGGTGAAATTGTTACTCCTTTACCTGTGAATGAAAATCAGAATGGTTCTACTCTATTCACTCTCCGGGAGGGGTCTCACTATCAGCTTAAGCTAAAATTTAGTGTTCTGCACAACATTGTGTCTGGCTTGACATACTCCAACACTGTGTGGAAAGGAGGGCTTCAAGTTGATCAGAGCAAAGGAATGTTGGGTACTTTTGCTCCTCAAAAGGAGCCATATGTATATGCCTTGAAGGAGGACACCACTCCCTCTGGTGCACTTGCAAGGGGTGTTTACTCAGCCAAACTTAAGTTTGAAGATGATGACAGAAGATGTCACATGGAACTCAAATATTTATTCGAGATAAAAAAGAGCAGCTAG 723 0.4149 MESGNGKRAQEEAGPSSGLSSASGIDGSKQEMTEKASDAFDDGREEEEEEEEEEGGIDDNKNGVFVPGPLLSLKEQIERDKEDESLRRWKEKLLGCLESDLDGQLDPEVKFHSIGILSEDFGEIVTPLPVNENQNGSTLFTLREGSHYQLKLKFSVLHNIVSGLTYSNTVWKGGLQVDQSKGMLGTFAPQKEPYVYALKEDTTPSGALARGVYSAKLKFEDDDRRCHMELKYLFEIKKSS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1202 240 MobiDBLite consensus disorder prediction 14 30 - -
Ssu4g1202 240 PANTHER RHO GDP-DISSOCIATION INHIBITOR 6 239 IPR000406 GO:0005094|GO:0005737
Ssu4g1202 240 PANTHER RHO GDP-DISSOCIATION INHIBITOR 1-LIKE 6 239 - -
Ssu4g1202 240 SUPERFAMILY E set domains 50 239 IPR014756 -
Ssu4g1202 240 MobiDBLite consensus disorder prediction 41 57 - -
Ssu4g1202 240 MobiDBLite consensus disorder prediction 1 65 - -
Ssu4g1202 240 Pfam RHO protein GDP dissociation inhibitor 50 238 IPR000406 GO:0005094|GO:0005737
Ssu4g1202 240 Gene3D Coagulation Factor XIII, subunit A, domain 1 64 240 IPR024792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1202 Ssu-Chr4 19111506 19114809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1202 K12462 - gmx:100810029 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1202 4 19111506 19114809 Ssu4g1202 4 19111506 19114809 ECH