Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1201 ATGGCGAAAAAACCGTTACTCAGCTTGCTCCTCCTCCTTGCCGTTCTCGCCGTCGCCGGAGCCTCATCCTCCGACGGCGCCGAGCTCGACTACTCCAAACTCTCCGGCATTATAATCCCTGGCTTCGCGTCCACTCAGCTCCGAGCATGGTCCATTCTCGACTGTCCTTTCTCTCCGCTCGATTTCAACCCTCTCGATTTGGTTTGGCTCGACACAACCAAACTTCTTTCTGCTGTGAATTGCTGGCTTAAGTGCATGGTGCTGGATCCTTACAACCAGACAGATCATCCTGATTGCAAGTCCCGTCCTGATAGCGGTCTTTCTGGTATTACGGAACTTGATCCAGGTTATATAACAGGACCTCTTTCATCGGTTTGGAAAGAATGGATTAAGTGGTGTATTGAATTCGGCATAGAAGCTAATGCAATAATTGCTGTTCCGTATGACTGGAGATTGTCGCCCTCCATGCTTGAAGAGCGGGATCTTTACTTTCATAAGCTAAAATTAACATTTGAAACTGCTTACAAACTTCGTGGTGGCCCCTCTTTAGTTTTTGCTCATTCATTGGGTAATCATGTTTTCCGTTATTTCTTGGAGTGGTTGAAGCTAGAGATTGCACCAAAACATTATATCCAGTGGCTGGATCAACATATTCATGCCTATTTTGCTGTTGGAGCTCCCCTTCTTGGTGCAACTGAAACCATTGAAGCAACACTTTCTGGATTCACATTTGGTCTTCCCATATCTGAGGGAACAGCTCGATCGATGTTCAACTCCTTTGGTTCATCATTATGGATGATACCTTTTTCCAAGTACTGTAGAACAGATAATAAATATTGGAAGCATTTTTCTGGGGGAAGGCATGTGGGTCAACAAACATATTACTGTGATGAGCGGGAGTTTCAGTCGAACTCTTCTGGGTGGCCAACGAAAATAATCAACATTGAAATTCCCTCAACTCGTGGATTTGATGCATATCCTTCATTCTCAGAAATGCCTGAGGCCAACTTGTCCAGCATGGAGTGTGGACTACCTACTCAATTATCTTTCTCAGCTCGTGAAATATCAGATGGCACCTTTTTCAAGGCAATTGAAGATTATGACCCAGACAGCAAGAGGCTCTTGTATCAGTTGGAGAAATCATATCTTGGAGATCCTGTTCTTAATCCCCTTACACCTTGGGACCGGCcaccaataaaaaatgtcttctGCATTTATGGGACTGATTCAAAGACAAAGGTTGGTTACTACTTTGCCCCTAGTGGCAAGCCTTACCCTGATAACTGGATCATTACGGATGTCATTTATGAGTTTGAAGGATCTCTAATCTCAAGGTCAGGGAATCTGGTTGAAGGGAACCCTGGAGCCATAAGTGGTGATGAGACGGTGCCATATCTCTCCCTTTCCTGGTGCAAGAACTGGCTTGGACCGAAGGTGAACATAACAAGAGCTCCTCAGTCAGAGCATGATGGTTCAGATGTACAGATTAAATTGAATGTGGAACATCACCATGAAGAAGATATTGTTCCAAACATGACAAGATCGCCTAGGGTTAAGTACATAACATTTTATGAAGATTCTGAAAGTCTTCCTGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATCGTTAGATCACCAGTGCTAATGAGGGAATTATGGCTTGAGATGTGGCATGATATCCATCCTGATGCAAAATCAGAGTTTGTCACAAAAGCTAAGCGTGGACCTTTAAGAGATGAGGACTGTTATTGGGATTATGGGAAAGCTCGTTGTGCATGGCCGGATTACTGTGAATATAGGTATGTTTTTGGTGATGTTCACTTGGGACAAAGCTGCAGGTTGAGATATACTACAGCTGATTTATTGTCgcattatttgtaa 1899 0.4329 MAKKPLLSLLLLLAVLAVAGASSSDGAELDYSKLSGIIIPGFASTQLRAWSILDCPFSPLDFNPLDLVWLDTTKLLSAVNCWLKCMVLDPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPSMLEERDLYFHKLKLTFETAYKLRGGPSLVFAHSLGNHVFRYFLEWLKLEIAPKHYIQWLDQHIHAYFAVGAPLLGATETIEATLSGFTFGLPISEGTARSMFNSFGSSLWMIPFSKYCRTDNKYWKHFSGGRHVGQQTYYCDEREFQSNSSGWPTKIINIEIPSTRGFDAYPSFSEMPEANLSSMECGLPTQLSFSAREISDGTFFKAIEDYDPDSKRLLYQLEKSYLGDPVLNPLTPWDRPPIKNVFCIYGTDSKTKVGYYFAPSGKPYPDNWIITDVIYEFEGSLISRSGNLVEGNPGAISGDETVPYLSLSWCKNWLGPKVNITRAPQSEHDGSDVQIKLNVEHHHEEDIVPNMTRSPRVKYITFYEDSESLPGKRTAVWELDKANHRNIVRSPVLMRELWLEMWHDIHPDAKSEFVTKAKRGPLRDEDCYWDYGKARCAWPDYCEYRYVFGDVHLGQSCRLRYTTADLLSHYL 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1201 632 PANTHER BNAA09G50730D PROTEIN 16 615 - -
Ssu4g1201 632 SUPERFAMILY alpha/beta-Hydrolases 164 474 IPR029058 -
Ssu4g1201 632 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 16 615 - -
Ssu4g1201 632 Pfam Lecithin:cholesterol acyltransferase 66 502 IPR003386 GO:0006629|GO:0008374
Ssu4g1201 632 Gene3D alpha/beta hydrolase 93 253 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1201 2 632 Acyl Lipid Metabolism Gene Families AT1G04010 76.258 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1201 - - gmx:100806466 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1201 4 19095193 19106140 Ssu4g1201 4 19095193 19106140 ECH