Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1136 ATGTCCTCCTCAATCGCCAACACAAGATCAGAGGTGTGGCGAGCTCGTGTAGGGTCTGCCCTACGGACCACCTTGGCATGCACCATCGCAGGTTGCTCCTCCCTCTACGGCCCCGCGCCCCTCCGACGCTACCTCGAGTTCCCGTCTTTCATGTACGCGACAACGGTCCTCATAGTGTCGGATGCGACACTCGGTGACACCCTCAGAGGTTGCTGGCACGTGCTTTGCTCGAACATCCAGGTCATGGTGCTGTCACTGCTTAGCCTGCAGCTGATAGGGCCTCACAACTTCACCAACCTCGTGGCCGCGCTGGCAATGGCAGGTTCTGCCTTCGCTGTTGCGCTGCCAGAATCGACCAACTTGGTCACCAAGCAACTTGCATTTGGACAGCTGGTGAATGTTTATGTTAGCACAGTCGTGACTGGTCCAGAAGGAGGGGTGGCCATACACCCGATTCATGTGGTCTGCTCTACGGCCTTTGGAGCTGTGGCTTCTGTCCTCGCCATGTTGATTCCTTTTCCTCTCCTCGCCTACTATGAGATAAGGAAGTTATACCGATTATACGCTAAGAACACTTGTGAGAGGTTCGATTGCAACATAGAGGTCATCTCTGCCTCAGACAATTCAACTGCTGTTAGTTTCTTAACTCAAGCCAAGTCCCTCTCCACAACAGGAGACAGGCTTCACCAGAGTATTACAAGTAAACTGGATGGCATGCATTGGGAACGAACAAAAGTTTTCAACCGCCATTGGATTGACCCAGAAGAAAAACAGCTAGACTTGGAGTTACCAATAAGAGCTATGGGCATTGCTCTATCAAATTGTACTTCTTTTCCTGTTGGGGTCATTGATGAGGAGCTCAGAGGTGTCTTGCACAATTGCAGAGGACAATTcagcaaaaaattaaatcagCGAGCCAATTGCTTTGATGCAACCACAACTTCAGAGATGAAAAAAGCCATTTTGACCAAAAACCTATCGATAGCCTATAAAGATCTCCCAACCTCGTTCTTTTTATACTGTGTGCATCTTCTCCTAGATGACTCGCCCATTGTAAAGAAAACTGACCATGTGCAGGGAATAACTCAGAAAAGTGGTGATTCTCGACGGAGCACCAGAAAGGTTGTGATGTACTTGACTCCCAGCTACATCAACTTGGCTTTTGCATTCAAGTCCTCTCTTACATTAGGCCTCGCTGTGTTTTTTGGTTTGACATATAACGAGGAAAATGGATACTGGGCGGGACTCTTAATCGCCCTATGTTTCGTGACTGGACGGCATCCAACATTCTCACTTGCAAATGCACGAGGACAAGGAACAGCAATGGGATCAATCTACGGGATCCTTTGTtgcttcattttcaaaaaaattgtaaaattcagTTTCTTACCTCTTTTACCATGggtcattttctcttcttttcttaggTATAGTAGAATGTATGGTGAAGCTGGTGGGATTGCAGCAATTACAGGGGCCTTATTAGTCGTTGGTATGAAGCACCATGACACTCCAAGTCAATTTGCACTTGCTAGAATCATCGAGGCCACAATAGGACTCCTTTGCTTTGCTACTGTAGAGATTCTTTTTAATCACTGCAGAGCTGCAACTCTAGCAAAATCTGAACTTTCTCAATGCTTGAGATCACTTCAAGATTGCATTGACAAGATTGCCTTTATTAATCCTACCAAAAGAGAGATGGCATTTTCAAGCTGTCAAGCATTGAGAGAAGGACAGAACAAGCTGAAATCTCTAGTGGGTCAATTAGAAGAGTTCACATTAGAGGCTGAATTGGAGCCAAATTTCTGGTTCATTCCATTTCATAGTGCCTGCTACAGAAAGATGCTGGAATCACTATCAAGGGCAGCAGATCTCTTACTTTTTGTGGCTTACTCAATGGAAAATGTCATGCTATTGTCACAGAAAAATGGAGCATTTTGGGTGGATCTCCATGATCGAGTGAACGAAAATGTGAGGACTTTTAAGAACAAAGTTGGCCCCACATTGAAATTCCTTGAAGAGATAACAACGAAAAAGTCTCCTAGGAAACTTGAAAATGAGTTGAACAGAAACATTCCTTGTGATATTGAGACACAAGAATATCCCAATGCAGATGCATTTAGGGTCCGGAGTGGAGATGAAGAGGTCGATAGCATTACAGCTCTTTTCTCACACATCTAG 2181 0.442 MSSSIANTRSEVWRARVGSALRTTLACTIAGCSSLYGPAPLRRYLEFPSFMYATTVLIVSDATLGDTLRGCWHVLCSNIQVMVLSLLSLQLIGPHNFTNLVAALAMAGSAFAVALPESTNLVTKQLAFGQLVNVYVSTVVTGPEGGVAIHPIHVVCSTAFGAVASVLAMLIPFPLLAYYEIRKLYRLYAKNTCERFDCNIEVISASDNSTAVSFLTQAKSLSTTGDRLHQSITSKLDGMHWERTKVFNRHWIDPEEKQLDLELPIRAMGIALSNCTSFPVGVIDEELRGVLHNCRGQFSKKLNQRANCFDATTTSEMKKAILTKNLSIAYKDLPTSFFLYCVHLLLDDSPIVKKTDHVQGITQKSGDSRRSTRKVVMYLTPSYINLAFAFKSSLTLGLAVFFGLTYNEENGYWAGLLIALCFVTGRHPTFSLANARGQGTAMGSIYGILCCFIFKKIVKFSFLPLLPWVIFSSFLRYSRMYGEAGGIAAITGALLVVGMKHHDTPSQFALARIIEATIGLLCFATVEILFNHCRAATLAKSELSQCLRSLQDCIDKIAFINPTKREMAFSSCQALREGQNKLKSLVGQLEEFTLEAELEPNFWFIPFHSACYRKMLESLSRAADLLLFVAYSMENVMLLSQKNGAFWVDLHDRVNENVRTFKNKVGPTLKFLEEITTKKSPRKLENELNRNIPCDIETQEYPNADAFRVRSGDEEVDSITALFSHI 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1136 726 Coils Coil 575 595 - -
Ssu4g1136 726 PANTHER P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED 8 724 - -
Ssu4g1136 726 PANTHER F3L24.34 PROTEIN 8 724 - -
Ssu4g1136 726 Pfam Fusaric acid resistance protein-like 398 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1136 Ssu-Chr4 18046527 18051284 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1136 - - aprc:113863134 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1136 4 18046527 18051284 Ssu4g1136 4 18046527 18051284 ECH