Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1121 ATGATGCCTTCAAGTTCGTCTGGCAAGGAGGTTGATACTTCAGTCATAGAATCACTCTCTGAGCATTCTGCTCATCAAACTTACTCACGCTCAATATCTCTGCCTACTCCTCTGAAGCTTATATCGGCCATGAAAGGTAGCCGAGAGAAACATGGGGGATCACAGGTGAAATTAAATGTGAAATGGGCCCCTGATGTGTATGATCCAGTACCTACATTATTATCACACACTGTCAGAAGCAACAAGAAGCAGCATAAATCCAGGAAGAAGAAGCCTGAAAAGAAGAATGGAAAGAAGGGTCAAAAGGGAAATTCATCTCGAGGGGGCAGCAGCAAAGATAAGCAGTTTCGCAAGCTAGGTGGGACTTCTGGTTTGTGCTACAAGTCAATGGATTCTTGTGATAAAGTGATTGGAGCTTCTACTGAATTAGATGCTCTTGATGTTCGTAGCCAGGACTCGTACTGTGGAACTAGTTTCTTGAAAAAATCAGTTACAGAAGTGCACTACTCGGTTGCAGAAGCGCTATGA 528 0.4356 MMPSSSSGKEVDTSVIESLSEHSAHQTYSRSISLPTPLKLISAMKGSREKHGGSQVKLNVKWAPDVYDPVPTLLSHTVRSNKKQHKSRKKKPEKKNGKKGQKGNSSRGGSSKDKQFRKLGGTSGLCYKSMDSCDKVIGASTELDALDVRSQDSYCGTSFLKKSVTEVHYSVAEAL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1121 175 MobiDBLite consensus disorder prediction 79 97 - -
Ssu4g1121 175 PANTHER OS05G0113500 PROTEIN 6 175 - -
Ssu4g1121 175 MobiDBLite consensus disorder prediction 1 36 - -
Ssu4g1121 175 MobiDBLite consensus disorder prediction 73 117 - -
Ssu4g1121 175 PANTHER OS05G0113500 PROTEIN 6 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1121 Ssu-Chr4 17836602 17838211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1121 - - gmx:100804857 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1121 4 17836602 17838211 Ssu4g1121 4 17836602 17838211 ECH
Ssu4g1121 4 17836602 17838211 Ssu7g2313 7 45380520 45382064 PCT