Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1081 ATGATTAAAGCAACGTTTAGCCTCCCTCCCCTGTGTATCATGGAATCTTTCTTCCTCAAAACCATGCTAGCTCAGAACCACACATTGCAGGGCGCGGATTGGTCATGGATGATAGAGTTCCTGAAGGGCATGGTGAAGCCAGTGGCTGCCACTGCGGTGGTGTTTCTGGCTGTGGCCTTGTCCTTCTACCAGAAGCTGGGGCTCGAGCTAGAGATGGTTGTTGCCATTCTGAGGGCATTTCTTCAGCTCTCTATTATTGGCTTTGTGTTGCAGTTCATTTTCAACCAGGACAACGCCGGATGGATCCTTCTAGCATACCTTTTCATGGTATCAGTTGCTGGTTACACAGCGGGTCAGCGTGCGAAACATGTCCCTCGTGGAAAGTATGTGGCTGGGGCTTCCATTCTCACAGGAACTGCGGTGACCATGTTCGTGCTGGTATCGCTGAGCGTGTTCCCTTTCACTCCCAGATATATCATACCTGTGGCAGGCATGATGGTTGGGAACTCAATGACAGTAACCGGTGTTACCATGAAAAGACTCCGAGACGACATCAAAACACAAATGAACTTGGTTGAGACGGCATTGGCTCTTGGTGCAACCCCGCGACAAGCAACGCATGAGCAAGTGAAAAGGGCTCTGATATTGGCTCTTTCTCCAGTGGTGGACAACACCAAAACAGTGGGTCTGATATCCCTTCCTGGGGCAATGACTGGTCTCATTATGGGAGGGGCCTCGCCGTTGGAAGCCATTCAACTACAGATTGTGGTCATGAATATGATGATAGGTGCAGCAACTGTTAGCAGCATAATGGCTACGTACCTCTGTTGGCCAGCATTCTTCACCAAGGCCTACCAGTTGGAAACCAAAGTCTTCTCAAGTTGA 885 0.4983 MIKATFSLPPLCIMESFFLKTMLAQNHTLQGADWSWMIEFLKGMVKPVAATAVVFLAVALSFYQKLGLELEMVVAILRAFLQLSIIGFVLQFIFNQDNAGWILLAYLFMVSVAGYTAGQRAKHVPRGKYVAGASILTGTAVTMFVLVSLSVFPFTPRYIIPVAGMMVGNSMTVTGVTMKRLRDDIKTQMNLVETALALGATPRQATHEQVKRALILALSPVVDNTKTVGLISLPGAMTGLIMGGASPLEAIQLQIVVMNMMIGAATVSSIMATYLCWPAFFTKAYQLETKVFSS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1081 294 TIGRFAM TIGR00245: TIGR00245 family protein 52 287 IPR005226 -
Ssu4g1081 294 PANTHER ALUMINUM SENSITIVE-LIKE PROTEIN 13 294 - -
Ssu4g1081 294 Pfam Uncharacterised protein family (UPF0014) 48 281 IPR005226 -
Ssu4g1081 294 PANTHER UPF0014 INNER MEMBRANE PROTEIN YBBM-RELATED 13 294 IPR005226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1081 Ssu-Chr4 17176393 17178256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1081 K02069 - gmx:100814304 497.664