Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1075 ATGGCAACCCCTaccgacaacaacaacaacaacaacccaGCACCTGAAAACCCTAACAAAACCCTAGAAGACCCCACCGCACCAGATCCAACCCCTGCCGCCAAGGACGTTGACGCCAAGGACGCCGATGCCAAGACATCTCCGCCGCCCGAATCCGGAAACGACGCTCCGCTCTCCGATATTCAGAAGAAGATCCGCCGCGCCGAGCGATTCGGCATTTCCGTCCAGTTGTCCGAGAAAGAGAAGCGCAATTCCCGAGCCGAAAGGTTTGGCACCGGGTCCGCTTCGCAGGAATCTGAGGCATCAAAATCGGAGGAGCGAAAGAGGAAGGCTAGGGCAGAGagGTTTGGGATGCCTAGTCCTACTACAGCTGCAGATGAGGAGGCAAAGAAGAAAGCTCGACTTGCTAGGTTTGCACCCGTTTCCAAAATTGATCCTTTGGAAGAAGATAAAAGGAAAGCAAGGGCACTTAGGTTTTCAGATCCGTCATCAACTTCTATAGCTAAAGTTAATGGCGAGGGAAAGATTGAGCCGAAGGCTGCTATTGCAGGCAAAGCTGGAGGAGGGACCTGA 573 0.5096 MATPTDNNNNNNPAPENPNKTLEDPTAPDPTPAAKDVDAKDADAKTSPPPESGNDAPLSDIQKKIRRAERFGISVQLSEKEKRNSRAERFGTGSASQESEASKSEERKRKARAERFGMPSPTTAADEEAKKKARLARFAPVSKIDPLEEDKRKARALRFSDPSSTSIAKVNGEGKIEPKAAIAGKAGGGT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1075 190 MobiDBLite consensus disorder prediction 1 19 - -
Ssu4g1075 190 MobiDBLite consensus disorder prediction 150 172 - -
Ssu4g1075 190 MobiDBLite consensus disorder prediction 100 115 - -
Ssu4g1075 190 MobiDBLite consensus disorder prediction 60 88 - -
Ssu4g1075 190 Pfam Tho1/MOS11 C-terminal domain 58 91 IPR040746 -
Ssu4g1075 190 Coils Coil 94 114 - -
Ssu4g1075 190 PANTHER PROTEIN MODIFIER OF SNC1 11 14 186 IPR044209 GO:0016973
Ssu4g1075 190 MobiDBLite consensus disorder prediction 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1075 Ssu-Chr4 17118942 17120212 Singletons
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1075 K18732 - gmx:100816435 235.343