LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu4g1053	ATGATTTCCGAACCGGCGAGTTCCCTGAGAAGGAGCAATGTCCAAGACCGACGCCTCAGCATCATCGACGTTTCCTCCGCCGACGATTCGCTTCTCGATCCTCTCTCCGAAAACCACCAACACTCAGAAAACCAAGAGCACGCAGATTTGTTGTACACTCCGAACTCGAAGAAGTTCGAAGACGCCGCCACCAAACTGGAACAGTGGGAGCACGAGCCTCACTCTAACGATGCATCCGGAATCGGAAAACCTAAGAAAAACAGCAAGTGCAACTTGCGCAAGAGTTTAGCCTGGGATAGTGCCTTTTTCACCGGCGCcgGGGTTTTGGATCCTGAGGAGTTGTCTAGTATAATTGAAGGTGTTGAGAAGCATGAATTACCGGATATTCAGGAGGACGTGTACAAGTCGTGTGAGTCCATATCTACGTTAGCGAGTGATAGCTTGACCTTTGAAAGTGTGGAGATGGAGGGCGATTTATTTGAGGATGTAAGAGCTTCAATTCAGAAATCAAGCAAAAAGTCCAGCCCTGCAGGTGCAAACACCAAACTGCCACCTTCCTCTGCGGTTCCAGGGTTCCAAACTCATGACTCTTCAAAGAAGGTTGGCTTGGTTTCTCGCAACAAGATGAAGGCCCCACCTGCCTCTAAGAATCCAAGTGTTGGCATGCAAGGATTTGGGAAGATGACGAAGAAGAATAATCCCATTTTTCCACAACTTCCACAGCCTGCTGCTACAAGGAGAGAGTCATCTATTTTAAAGCAATCAAAGGTACCAGGAAAGTCTACTTTAAGTTCCACAATTTCATCCAAGAGAGAATCACTTGGGAATCTACATGTCAAAAGTGAAAGGGACAAGGCAAAACGAATAGTTGGTGATAGAGTCAGTTCAGTGACGAAAGCATCTGTTATTGGAGGTTCTCGACGTACTGTGCCTAAGCCCACACTACCATCCAAATCACCTTCTGGTCCGTCAGTATCAGCCAGGACTAAATCAGTAACTTCCACATCTTCTGCTGTCAAAACACCTTCAAGAATTGCTTCAATAAATAAAGCTGAACATGGGATTTCTAGTCTTTCAAGCTTGATGTCTGCCGCAAAGCTTTCTTCTAGTGTTTCACCCTCTAGCTCTATCAGTGACTGGTCTTCATCAgaatcatcttcatcaacttaTATGGCTAAGCGTGTGTGTAATAGTTCAAGGTCCAGCCTTGATAGTGGCTCAAGCAGAAAGGTTTTATCGGACACTGATGCAGTTCAAGGTACAAATTCTCAGATTCCTCAGAGTGATTCAAGCTTAGAAAGGCAAGAGGCTCAGCATACTGGGTTTATTAGTCAAAAGGAAAGGACAGCTCCTGGAGCAACAGTTCTTCCTCCAGCTCCCAAAAAACCTTCGGGCCTTCGACTGCCTTCACCAAAGATTGGTTTTTTTGATGGGGTGAAGCCCTTAGTGCGCACTCCACGTGGGGGACTGCAACCACGCTCTGTTGTACCTGGTGGCTTGCCAAAACATGGAGCAGAAAGTCCAAGTGAAGGCCAAAACAAAGCAGAACTTGGAAAGCTGCAACCGTCTAGATCTATCATGTCAATTGAAAATACAAAACCCAATAACCAGCAAGCTCCACAACCACATCCTTTTCATGAATCATTAGAAGTTGCAACTAAGACATCCAATAGTGTGCAGAATGTCAAAAGCTCCTCTGACATACCCATGGGTGCTGTTCAAAATACATCACTCTTCCATGTAGTGGAGAAAGCTCATCATGATTTGCTACCACTTAAGGGTGTCAATAACCAGGAAAACGCTCATCATGATGATGAAATTGATTGTTTGAGCAAACAAGTTGGACTTATGGACATAAAATTTGAGACATGGGAAAAGTTTAATGGTGATTCCCTTTCTTTATTGCAGACTGATATCAGCTCCCAAGATAAATTCAATGGTCTGGAGTTCTCTAGTCGCAAAGAGCTTATTGATTGTCCTAAGAAAGAGGAATTATTGAAGGGTTCATCTACTACATGTCTATCTGTCTCCCCAACCAGCTTTGATATGGAAGCTTCAACAAGGAGACCCTTTGCAGTCAAAGATTCCTTTTGCAACATGGATGACATTGTCTTTACAGAATCAACCGTTTCAGAGACAAAACAGACTAGCTTACCAGTGCCCGAGAGCATTATTATGAAAGAAAACAAGTGA	2193	0.4391	MISEPASSLRRSNVQDRRLSIIDVSSADDSLLDPLSENHQHSENQEHADLLYTPNSKKFEDAATKLEQWEHEPHSNDASGIGKPKKNSKCNLRKSLAWDSAFFTGAGVLDPEELSSIIEGVEKHELPDIQEDVYKSCESISTLASDSLTFESVEMEGDLFEDVRASIQKSSKKSSPAGANTKLPPSSAVPGFQTHDSSKKVGLVSRNKMKAPPASKNPSVGMQGFGKMTKKNNPIFPQLPQPAATRRESSILKQSKVPGKSTLSSTISSKRESLGNLHVKSERDKAKRIVGDRVSSVTKASVIGGSRRTVPKPTLPSKSPSGPSVSARTKSVTSTSSAVKTPSRIASINKAEHGISSLSSLMSAAKLSSSVSPSSSISDWSSSESSSSTYMAKRVCNSSRSSLDSGSSRKVLSDTDAVQGTNSQIPQSDSSLERQEAQHTGFISQKERTAPGATVLPPAPKKPSGLRLPSPKIGFFDGVKPLVRTPRGGLQPRSVVPGGLPKHGAESPSEGQNKAELGKLQPSRSIMSIENTKPNNQQAPQPHPFHESLEVATKTSNSVQNVKSSSDIPMGAVQNTSLFHVVEKAHHDLLPLKGVNNQENAHHDDEIDCLSKQVGLMDIKFETWEKFNGDSLSLLQTDISSQDKFNGLEFSSRKELIDCPKKEELLKGSSTTCLSVSPTSFDMEASTRRPFAVKDSFCNMDDIVFTESTVSETKQTSLPVPESIIMKENK	730

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu4g1053	730	MobiDBLite	consensus disorder prediction	368	447	-	-
	Ssu4g1053	730	MobiDBLite	consensus disorder prediction	234	274	-	-
	Ssu4g1053	730	MobiDBLite	consensus disorder prediction	275	292	-	-
	Ssu4g1053	730	MobiDBLite	consensus disorder prediction	484	517	-	-
	Ssu4g1053	730	PANTHER	OS05G0121800 PROTEIN	18	574	-	-
	Ssu4g1053	730	MobiDBLite	consensus disorder prediction	67	87	-	-
	Ssu4g1053	730	MobiDBLite	consensus disorder prediction	368	470	-	-
	Ssu4g1053	730	PANTHER	OS05G0121800 PROTEIN	18	574	IPR045882	GO:0008017
	Ssu4g1053	730	MobiDBLite	consensus disorder prediction	167	350	-	-
	Ssu4g1053	730	MobiDBLite	consensus disorder prediction	312	350	-	-
	Ssu4g1053	730	MobiDBLite	consensus disorder prediction	30	54	-	-
	Ssu4g1053	730	MobiDBLite	consensus disorder prediction	169	200	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu4g1053	Ssu-Chr4	16807043	16810882	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu4g1053	-		-	gmx:100785074	1086.25