Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1026 ATGGGTAACCGGTGGTTACTACACTGCGGAGCTAAGAGCCTTTACGTTGGAGAAGGGTCCTCAACGGCCGTTGCGGCAATGAAACAGTTAGGTTTCTCCAGCGTCACCGGCGTCCCAACGCACCGTTTCGAGCAGAGGAATGTCCTGTACGAGGATAATTCCTTCGATTTCGTGTTCTCCAGGGACCTCGACAAGGTTCCAGTCCCTGCTTTGCTCGTGCTCGAGGTTGAGCGTGTCCTTAAGCCTGGTGGGGTCGGTGCCCTTCTCGTAGGTGCCACTGGTTCCCATCCCAATGATTTGATAAGGGCAGCCACGCCTGTGTCCTCTTTATTGAGGTCTTCCACTGTGGTGCACGTTGGTTCTGTCAACGAGCTTATCCTTGTGGTTTTCAAGAAAAGATTTGAAAACGCTACTTCATTTTATCAGCATCGTTTACCCGAGGATTGTCCGAGTCTCACCTTCACCAAACCCCTCATAGAGTTGATGGAGCCTCTCCTGAGTGAGAGACAGAAACCCCCACCTGAGTTTTACAAGAACATTCCCTATTTGCCCAAGTTTGTGGATGTTTCCAATAGGAAGAGGTTGGTGTATGTTGATATTGGGGTTGGGGAGCTGCTTCATGCCAATGTTAGTGATTGGTTCCTCCCGTCGTATCCCATTGATCAGAAAGATTTCAATGTGTATTTTGTTCACTACAACACTTCAATTATGTTGTCCTATGTGAAGCGACCTGGCGTTACCTTTGTTTATCACCCTGGGTTGGATGATAAGGTCATGCCCAAGCATGGTACGGATGGGGACATGGACCCTTTTCTTGGGGAGGAGGAGTTTGATTTCCTTGCCTGGTTCAAAGAAACTGTGCAATATGCTGATTTTGTGGTCCTGAAGATGAATGCTGCAAAAGTTGAACTCAAGTTCCTCTCGGATATATTTGACAGTGGAGCTATATGCTTTGTCGATGAGTTGTTTCTGAGGTGTCCGGAGAGGGGAGGTGATGATAAAACTATGAGCAGCAAGGAAAGTTGCTTGGATATTTACAAGGGTCTCCGAAGCAATGGTGTCTATGTCCATCAGTGGTGGGGAGACTAA 1089 0.4793 MGNRWLLHCGAKSLYVGEGSSTAVAAMKQLGFSSVTGVPTHRFEQRNVLYEDNSFDFVFSRDLDKVPVPALLVLEVERVLKPGGVGALLVGATGSHPNDLIRAATPVSSLLRSSTVVHVGSVNELILVVFKKRFENATSFYQHRLPEDCPSLTFTKPLIELMEPLLSERQKPPPEFYKNIPYLPKFVDVSNRKRLVYVDIGVGELLHANVSDWFLPSYPIDQKDFNVYFVHYNTSIMLSYVKRPGVTFVYHPGLDDKVMPKHGTDGDMDPFLGEEEFDFLAWFKETVQYADFVVLKMNAAKVELKFLSDIFDSGAICFVDELFLRCPERGGDDKTMSSKESCLDIYKGLRSNGVYVHQWWGD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1026 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 45 143 IPR029063 -
Ssu4g1026 362 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 2 362 - -
Ssu4g1026 362 PANTHER PEPTIDE UPSTREAM PROTEIN 2 362 - -
Ssu4g1026 362 Pfam Methyltransferase domain 43 85 IPR013216 GO:0008168
Ssu4g1026 362 Gene3D Vaccinia Virus protein VP39 8 144 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1026 Ssu-Chr4 16495104 16496192 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1026 - - gmx:100783651 579.711