Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1021 ATGGCGTCTAGGAAGAGCTTCCTGTCGAAAGTGAGTTCCATCTTTGCACCAAGCACCGATTTGGAACCAAAATCCACAGAGGGTGACTTGGAATTGGATGAAGCTGACGTGTGGAACttatccaacaacaacaacaccgTGACAGAGGCGAAGAAGGGGTCACGATCTGCTAAGAAGAAAGGTAAAAAGGTGGAGGGTGGTGGCAGAGTGAACCCTGTGGCCTCATCCTCATTGCCAGTGAATATACCCGATTGGTCCAAGATTTTGAAAGAGGACTATAAGGATCACAAGAAGAGAGTCACCGATGAAGATGTTGTTAGTGATGATGACAACGATGGAGGGGATCGAGTACCTCCTCATGAGTATCTTGCTAGGACCAGAGGGGCTTCTCTCTCGGTGCATGAAGGGAGAGGAAGGACCCTCAAGGGTAGGGACTTGCGCAGTGTCAGGAATGCCATTTGGAAGAAAATGGGGTTTGAAGACTGA 486 0.4691 MASRKSFLSKVSSIFAPSTDLEPKSTEGDLELDEADVWNLSNNNNTVTEAKKGSRSAKKKGKKVEGGGRVNPVASSSLPVNIPDWSKILKEDYKDHKKRVTDEDVVSDDDNDGGDRVPPHEYLARTRGASLSVHEGRGRTLKGRDLRSVRNAIWKKMGFED 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1021 161 Pfam Senescence regulator 50 161 IPR007608 -
Ssu4g1021 161 MobiDBLite consensus disorder prediction 37 51 - -
Ssu4g1021 161 MobiDBLite consensus disorder prediction 96 122 - -
Ssu4g1021 161 MobiDBLite consensus disorder prediction 18 78 - -
Ssu4g1021 161 PANTHER EMB|CAB72159.1 1 161 - -
Ssu4g1021 161 PANTHER ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16 1 161 - -
Ssu4g1021 161 MobiDBLite consensus disorder prediction 96 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1021 Ssu-Chr4 16415829 16416314 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1021 - - vra:106757485 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1021 4 16415829 16416314 Ssu4g1021 4 16415829 16416314 ECH