Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1007 ATGGCGGTGCCTCCGTCGTCGCTGGAGAACCAATTCGACGAGTTTAGGGTTCAGCTGGAAGAATCTGGAACCTTGCGCGACCGAATTCGAAGCGTCGTTTCGGAGATCGAGTCCTCCACTAGGCTCATCTATGCTACCCTTCTTCTCGTTCACCAGTCTCGCCCCACTCCCGAGCTTTTAGAGAAGGCCAAGTCTCAGATTGATGTGTTAAAGGAGCAGTATAAGCAACTTGCTGAAATTCTTGGAGGATGCCCTGGGCAATACTATAGGTATCATGGTGATTGGAGGAGTGAGACACAATCCGTGGTTTCAATGCTTGCTTTTATGCACTGGCTTGAAACAGGAATCCTTCTCGAGCACAAAGAAGCTGAGGAAAAACTTGGGTTGAATAGTTCAGACTTTGGCCTAGACATTGAAGACTACTTAATAGGTGTCTGTTTTATGTCTAGTGAATTGCCAAGGTATGTGGTGAATCAAGTGACTGCTGGGGACTATGATTGTCCAAGGAAGGTCTTAAAGTTCTTAACAGATCTCCATGCTGCATTCCGCATGCTTAATCTTCGCAATGATTTTTTGCGAAAGAAGTTTGATGGCATGAAGTATGACCTAAGAAAAGTAGAAGAAGTTTACTATGATGTTAAGATTCGAGGTTTGACACCGAATGGTGAGGCAGTTGGAGATCAAGGAATCGAAGGACAATCTTAA 705 0.4482 MAVPPSSLENQFDEFRVQLEESGTLRDRIRSVVSEIESSTRLIYATLLLVHQSRPTPELLEKAKSQIDVLKEQYKQLAEILGGCPGQYYRYHGDWRSETQSVVSMLAFMHWLETGILLEHKEAEEKLGLNSSDFGLDIEDYLIGVCFMSSELPRYVVNQVTAGDYDCPRKVLKFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLTPNGEAVGDQGIEGQS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1007 234 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 6 221 IPR002848 GO:0043565
Ssu4g1007 234 SUPERFAMILY Translin 7 218 IPR036081 GO:0043565
Ssu4g1007 234 Coils Coil 60 80 - -
Ssu4g1007 234 PANTHER TRANSLIN 6 221 IPR033956 GO:0003697|GO:0003723|GO:0016070
Ssu4g1007 234 Gene3D Translin; domain 2 134 230 IPR016069 GO:0043565
Ssu4g1007 234 Pfam Translin family 26 217 IPR002848 GO:0043565
Ssu4g1007 234 Gene3D Translin; domain 1 3 133 IPR016068 GO:0043565
Ssu4g1007 234 CDD Translin 15 217 IPR033956 GO:0003697|GO:0003723|GO:0016070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1007 - - gmx:100811968 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1007 4 16147394 16150529 Ssu4g1007 4 16147394 16150529 ECH