Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1003 ATGGCAGTGAAGGAAAGCAACACAAGCCAAAATAGtcagcagcagcagcaacaacaacaacaagaagctTGTGATCCTTGCAGGTCTTTTGGCCAAAAGTGCAGTCACTTGGTCAAGAAACAGCGTGCCAAATTCTACATTCTTCGCCGCTGCATCGCCATGCTTTTGTGTTGGCATGAGCGTGGTGAGACATAA 195 0.3897 MAVKESNTSQNSQQQQQQQQQEACDPCRSFGQKCSHLVKKQRAKFYILRRCIAMLLCWHERGET 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1003 64 PANTHER DVL FAMILY PROTEIN 1 64 - -
Ssu4g1003 64 Pfam DVL family 39 57 IPR012552 GO:0008285
Ssu4g1003 64 PANTHER DVL19-RELATED-RELATED 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1003 Ssu-Chr4 16058925 16059119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1003 - - pvu:PHAVU_001G178700g 104.375