Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0991 ATGAGTAGCAACGACCAAGATAAGCCAAACAAAGGGTTGGAAGGCACTGCCATAGATTTACCCATCAACCGTCGTGCCAACTTGAAAAGCGCCACCAGCGACGACGACTTCACCAACATTCTCGCACACATCAAATCCTCCAAAACCCCCGTGAGCAACCACACATCAAATGCCATAATCGATTACTTTAATTCCAACAACCTCGTCCCTTTTATTTCCCACGTTCTCACTTCACTGCACACAAACGTTCATcgccttattttgtttttgttttttcctattGCCTCGTATGCGATTTCTTATAGGAGGTATGTATTTGATTCTTCTGTTCTGTCACAAAATTGTTTGCAGGCTGTTATCAATTATGGCGCTTCTTGGTGTCGCGTTTGTAGCCAAATTCTCCCAGCATTCTGTAGACTGAGCAATAATTTTCCAAAGCTTACCTTTGTATACGCAGACATTGATGAATGCCCGGAAACAACTCAACACATTCGATACACCCCCACCTTCCAATTTTACCGAAATGGTGAGAAGGTAGATGAGATGTATGGTGCTGGAGAAGAGAGGCTCCATGATCGCCTGTGGTTGCACTCTTAA 597 0.4238 MSSNDQDKPNKGLEGTAIDLPINRRANLKSATSDDDFTNILAHIKSSKTPVSNHTSNAIIDYFNSNNLVPFISHVLTSLHTNVHRLILFLFFPIASYAISYRRYVFDSSVLSQNCLQAVINYGASWCRVCSQILPAFCRLSNNFPKLTFVYADIDECPETTQHIRYTPTFQFYRNGEKVDEMYGAGEERLHDRLWLHS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0991 198 PANTHER THIOREDOXIN-LIKE 3-3 116 198 IPR044193 -
Ssu4g0991 198 PANTHER THIOREDOXIN-LIKE 3-3 4 51 IPR044193 -
Ssu4g0991 198 CDD TRX_family 118 194 - -
Ssu4g0991 198 SUPERFAMILY Thioredoxin-like 118 192 IPR036249 -
Ssu4g0991 198 Gene3D Glutaredoxin 22 196 - -
Ssu4g0991 198 Pfam Thioredoxin 106 190 IPR013766 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0991 K03671 - pvy:116119872 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0991 4 15807647 15808606 Ssu4g0991 4 15807647 15808606 ECH