Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0990 ATGGAGATCGACAAAGCAGTTAGAGAGTGTGACGATCGAAGGCTTCAGACCAAGTACAACAACGCTACCTATGTTATTCAGAGAGCTTTGGCTTTGTATTCTATTGAGGAGGTTGCCTTCAGCTTCAATGGAGGGAAGGATTCAACAGTTTTGTTGCACCTACTCAGGGCTGGCTATTTCTTGCATAAAAAGGGGCAAAATAATGCCAATGGTGATCTAAAAGATTTTCCAATTCGAACAATTTATTTTGAGAGTCCTTGTGCCTTCCTGGAAATCAACTCATTTACCTATGATACAGCTGCTACCTATGGGTTGCAAATTGACACCATTCACACAGATTTCAAGTCTGGTTTGGAGGCTTTGCTGAAGGATAAACCAATTCGAGCTATCTTCCTTGGAGTTCGAATTGGAGACCCTACTGCGGTTGGCCAAGAACAATTCTCCCCTAGTTCACTTGGGTGGCCACCTTTCATGAGAGTTAATCCCATTTTAGATTGGTCATACAGAGATGTGTGGGCCTTCCTCTTAACGTGCAAGGTGAACTATTGCAGCCTTTATGATCAaggTTATACTTCAATTGGGAGCATATATGACACAGTTCCCAACTCATTATTATCCATTAGCAATTCTTCCAATAAATTCAAACCAGCATATTTACTTGCTGATGGAAGATTAGAGAGGGCAGGGAGGGCTAAAAGGCCATCTCCTTCTACTGGCGGACAACTTCCTGCCGATAGCAATGACTTGACTAGCCAGGATTTGCATAAAAACAGCATGCTCACAGCATCAATCATTGCTGTGGGAGATGAGATTCTGTTTGGCATTGTTGAGGATCAGTTGGGACCTTATTTGTGTAGGAAGTTGCATTCCATTGGTTGGTCTGTGTTTCAACTTTCTGTTGTACACAACAATATAGATTCTGTGGCCGAAGAAGTTGAGCGACAGAAATCTAAAAGTGACATGGTATTTATATATGGAGGTGTAGGTCCACTGCATTCAGATGTTACCTTAGCAGGCATTGCAAAAGCTGTTGGTGTTCGTTTGGCTCCTGATGAAGAATTTGAAGAATATCTCAGGCATATTATTGGTGATCAGTGTACTGGTGACCGAAATGAGATGGCTCAATTGCCTGAGGGCATAACTGAATTATGGCATCATGACAAATTGTCTGTGCCCTTGATCAAGTGCCAAAATGTAGTAATTCTAAGTGCAACAAATGTTCTGGAGCTGGAAAAGCAGTGGGACTGTTGGATTGAATTAGCAAAATCTGGTGACTTGCTAGCGTTGCTGGAACCATATGTATCAAAGCACGTGACAACTAATCTGTCAGATGTGTGTACTAACTTTCATATATCATGA 1359 0.4172 MEIDKAVRECDDRRLQTKYNNATYVIQRALALYSIEEVAFSFNGGKDSTVLLHLLRAGYFLHKKGQNNANGDLKDFPIRTIYFESPCAFLEINSFTYDTAATYGLQIDTIHTDFKSGLEALLKDKPIRAIFLGVRIGDPTAVGQEQFSPSSLGWPPFMRVNPILDWSYRDVWAFLLTCKVNYCSLYDQGYTSIGSIYDTVPNSLLSISNSSNKFKPAYLLADGRLERAGRAKRPSPSTGGQLPADSNDLTSQDLHKNSMLTASIIAVGDEILFGIVEDQLGPYLCRKLHSIGWSVFQLSVVHNNIDSVAEEVERQKSKSDMVFIYGGVGPLHSDVTLAGIAKAVGVRLAPDEEFEEYLRHIIGDQCTGDRNEMAQLPEGITELWHHDKLSVPLIKCQNVVILSATNVLELEKQWDCWIELAKSGDLLALLEPYVSKHVTTNLSDVCTNFHIS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0990 452 CDD PAPS_reductase 37 194 IPR002500 GO:0003824
Ssu4g0990 452 Gene3D - 258 415 IPR036425 -
Ssu4g0990 452 PANTHER FAD SYNTHASE-LIKE 1 446 - -
Ssu4g0990 452 MobiDBLite consensus disorder prediction 228 248 - -
Ssu4g0990 452 Gene3D HUPs 2 234 IPR014729 -
Ssu4g0990 452 Pfam Phosphoadenosine phosphosulfate reductase family 120 200 IPR002500 GO:0003824
Ssu4g0990 452 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 1 446 - -
Ssu4g0990 452 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 189 - -
Ssu4g0990 452 Pfam Probable molybdopterin binding domain 264 359 IPR001453 -
Ssu4g0990 452 SMART MoCF_biosynth_3a 263 424 IPR001453 -
Ssu4g0990 452 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 259 384 IPR036425 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0990 - - gmx:100816619 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0990 4 15796909 15804074 Ssu4g0990 4 15796909 15804074 ECH