Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0964 ATGACCAAGAAGAGGACCACACCTgagaacaaaaacaacaacaaaaggaagACAAAAATGATAATCCCCATGCCAAAACATTCTCAACAGCCAAGAAGCTCACCTCCCAAACGCCGCACTGATTTCTCTGTGTTCACGCGCACTCCCTCCTCCTTCTCCAGCCCTGCTTCTGGTTCCTCACCAGGTTCATCTTCTGGTGAAGTGAGGTTGTCCAATGTCACTGCGAGCAGTTTGCAGGAGGGGAGAATGCCAATGAAACAGTTTTCTGAAGATATGCTGGTTCGATGCAGCATTTACCAAGAGGGTAGACCAGTCTGTTCATCTGAGTTTTTTGATGCTCCAGTTGTGGAAGTTGATTCAGCTGTCCGAGATGAAAGTCTCAACCTTGGTGGCAATAGTAGGGATGCCTGCAATGAAAGAATTGATATTTCCAAGATGTCAGAATCTACCCCTCTTGAATCATCTGTCAGTGAAAGCAGTTCTGTTGCTGTAACTCCTGGAAGTGTTGTATGGGCAAGGACAGCTTGTCAAATGTGGTGGCCTGCTGAgGTTATGGAAGAAACACCTGCGTTATCCAACCCTGGCAGTGATGGACATGTTTTAGTGCAGTTTTATGGAAATCTTCCCAGTACCCGGATTGATCCAATGAcagatatttcaaattttgaggaCTCTTTTGAAGAAAGGAGCAATAACCCTTCAGAAGATTTTCAACAGGCTTTAAAGCAAGCATTACAGAGGAAGGCACAACTTAGTTCTTGCCAAAAGTTGACTCCTGATAGGTCTGCTCACTCTGATCAGCAAGAACACTCATTTGATAAATGCACTTCAACTAGCACAAGCAGGACAATTGATGATTTTCAAGAGAGACGAAGAGGGAAAAGGGAACGTAAACCCAAAGTTCACTTTGATGAGGTTACATATCCAATGAAATCAGACAGAAAGGTTCGTCGGTTAAAGATAATGCGGTACCTCGGCCTTGCAGCTCCAATTGGTTCTCCCTTTTGA 1008 0.4266 MTKKRTTPENKNNNKRKTKMIIPMPKHSQQPRSSPPKRRTDFSVFTRTPSSFSSPASGSSPGSSSGEVRLSNVTASSLQEGRMPMKQFSEDMLVRCSIYQEGRPVCSSEFFDAPVVEVDSAVRDESLNLGGNSRDACNERIDISKMSESTPLESSVSESSSVAVTPGSVVWARTACQMWWPAEVMEETPALSNPGSDGHVLVQFYGNLPSTRIDPMTDISNFEDSFEERSNNPSEDFQQALKQALQRKAQLSSCQKLTPDRSAHSDQQEHSFDKCTSTSTSRTIDDFQERRRGKRERKPKVHFDEVTYPMKSDRKVRRLKIMRYLGLAAPIGSPF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0964 335 MobiDBLite consensus disorder prediction 1 78 - -
Ssu4g0964 335 Pfam PWWP domain 167 246 IPR000313 -
Ssu4g0964 335 ProSiteProfiles PWWP domain profile. 166 207 IPR000313 -
Ssu4g0964 335 MobiDBLite consensus disorder prediction 254 300 - -
Ssu4g0964 335 MobiDBLite consensus disorder prediction 1 16 - -
Ssu4g0964 335 PANTHER OS08G0477800 PROTEIN 311 335 - -
Ssu4g0964 335 PANTHER OS08G0477800 PROTEIN 149 272 - -
Ssu4g0964 335 MobiDBLite consensus disorder prediction 35 78 - -
Ssu4g0964 335 PANTHER ALDOLASE-RELATED 311 335 - -
Ssu4g0964 335 PANTHER ALDOLASE-RELATED 149 272 - -
Ssu4g0964 335 Gene3D - 153 258 - -
Ssu4g0964 335 SUPERFAMILY Tudor/PWWP/MBT 161 255 - -
Ssu4g0964 335 MobiDBLite consensus disorder prediction 284 300 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0964 - - gmx:100801494 488.804