Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0963 ATGGCTTCCTCAACCTCAATTCCCGCATCCGAGGCCGTGCAGGTTCTCCTCTCCTTACTCGCCGACGATTCTTCCTCCGTCAGAGAGGCCTCCATGTCCTCACTCAAGGACATTGCAGCACTGAATCCTCTTCTCGTTCTCGATTGCTGCGCCGTCGTTTCGCGCGGGGGACGTCGGCGATTCGGGAACATGGCTGGAGTTTTTCAAGTGATGGCGTTCGGAGTTCGAGCGCTTGACAAAAGAGACGTCGATTCTGCTTTCATGGCGAAGCTCGCTAAGATTGCTACAGCTGAGATGATATCCTCAAAGGAACTAAATTCTGATTGGCAACGAGCAGCAACAAGCCTACTTGTTGCAATAGGCTCACATTTACCTGATCTCATGATGGAGgaaatttttcttcatttatctGGGACAAATTCAACATTACAGGCTATGGTTCAAATCCTGGCAGAATTTGCTTCTACTGATCCCTTGCAGTTCATTCCACGTTGGAAAGGTGTACTTTCACGAATTTTGCCAATTCTTGGAAATGTGCGAGACATGCACCGACCAATTTTTGCAAATGCATTTAAATGTTGGTGTCAAGCTGCTTGGCAATATAGTATAGATTTTCCTTCACATTTTCCCCAAGATGGTGATGTTATGTCATTTCTAAATTCTGCTTTTGAGCTTTTGTTGAGAGTTTGGGCAGCTTCGAGAGACCTAAAGGTTCGTGTGGCAGCTGTAGAAGCACTTGGTCAGATGGTAGGTCTCATAACACGAACACAATTAAAGACTGCCCTACCAAGGCTTATTCCTACAATATTGGACTTGTATAAAAAGGATCAAGATATAGCTTTTCTGGCTACATGTAGTCTCCACAATCTGTTAAATGCCTCTTTACTGTCTGAAAGTGGCCCTCCTATGCTTGATTTTGAGGATTTGACGCTTGTTTTATCAACACTTCTACCTGTGGTTTCTATCAATAATGACAGCAAAGACCAATCAGATTTCTCTATGGGACTGAAGATGTATAATGAGGTTCAGCATTGCTTTCTGACAGTTGGCTTGGTGTATCCAGATGATTTGTTTTTGTTCCTTGTAAATAAATGCAGGTTGAGGGAAGAACCATCGACTTTTGGTGCACTTTGCATTTTGAAGCATCTTTTACCAAGGCTGTCTGAAGCTTGGCATAGTAAAATACCTCTACTAGTCGAAGCTGTGAAGTCCTTGCTTGAGGAGCAGAATTTAGGTGTTCGGAAGGCAGTTTCTGAGttaattgTGGTTATGGCTTCTCACTGTTACTTGGTTGGTTCGTCTGGAGAGTTGTTCATTGAATATCTTGTACGCCATTGCGCTATAACTGATCAAAATCGGAGTGATCTTGATAGCACACCAAATAAGAGAATAGAGataaaaattggACTAGTTACTCCTGGTGAGTTAAGAGCAGTTTGTGAAAAAGGTCTCCTTTTGGTAACTATTACGATTCCTGAAATGGagCATATTCTTTGGCCTTTTCTGTTGAGGATGATTACTCCACGGACCTACACTGGTGCTGTGGCCACGGTGTGCAGGTGTATCTCGGAATTGTGGCGGCATAGGTCATATAGCAATGATATGTTGAGTGAGTGTAAAACTCGTCCTGATATACCAACTGCTGAGGAACTTCTTGCCCGTTTGGTGGTGCTTTTGCATGATCCTCTAGCAAGGGAGCAATTGGCCACCCAAATTTTGACAgttcTATGTCTTCTGGCACCTCTATTtccaaaaaatatcaatttgttttggCAAGATGagCTCTAG 1788 0.4228 MASSTSIPASEAVQVLLSLLADDSSSVREASMSSLKDIAALNPLLVLDCCAVVSRGGRRRFGNMAGVFQVMAFGVRALDKRDVDSAFMAKLAKIATAEMISSKELNSDWQRAATSLLVAIGSHLPDLMMEEIFLHLSGTNSTLQAMVQILAEFASTDPLQFIPRWKGVLSRILPILGNVRDMHRPIFANAFKCWCQAAWQYSIDFPSHFPQDGDVMSFLNSAFELLLRVWAASRDLKVRVAAVEALGQMVGLITRTQLKTALPRLIPTILDLYKKDQDIAFLATCSLHNLLNASLLSESGPPMLDFEDLTLVLSTLLPVVSINNDSKDQSDFSMGLKMYNEVQHCFLTVGLVYPDDLFLFLVNKCRLREEPSTFGALCILKHLLPRLSEAWHSKIPLLVEAVKSLLEEQNLGVRKAVSELIVVMASHCYLVGSSGELFIEYLVRHCAITDQNRSDLDSTPNKRIEIKIGLVTPGELRAVCEKGLLLVTITIPEMEHILWPFLLRMITPRTYTGAVATVCRCISELWRHRSYSNDMLSECKTRPDIPTAEELLARLVVLLHDPLAREQLATQILTVLCLLAPLFPKNINLFWQDEL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0963 595 PANTHER MAESTRO HEAT-LIKE REPEAT FAMILY MEMBER 1 42 595 - -
Ssu4g0963 595 Gene3D - 212 431 IPR011989 -
Ssu4g0963 595 PANTHER MAESTRO-RELATED HEAT DOMAIN-CONTAINING 42 595 IPR045206 -
Ssu4g0963 595 SUPERFAMILY ARM repeat 11 587 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0963 K24816 - gmx:100800961 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0963 4 15308864 15329652 Ssu4g0963 4 15308864 15329652 ECH