Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0962 ATGAAGGCATATGTTAGTGATACAGAAGACTTGAAACAGGATCCGTCATATCAAGACACTTGGGATGACATGATAATCAATTTTCTTGCAGAATCTTTGGATGTGATCCAAGATGCAGATTGGGTTATGTCTCTTGGAAATGTTTTTGCCAAACATTATGAACTTTATGCATCTGATGATCAACACACTGCACTTCTTCACCGGTGCTTGGGAATTCTGCTTCAAAAGGTTAATGACAGAGCTTATGTCCGTGATAAAATAGATTGGATGTACAATCAAGCAAACATTGCAGTTCCAACAAATAGACTTGGGTTGGCAAAAGCAATGGGATTGGTTGCTGCATCACACTTGGATACAGTGTTGGAGAAGCTGAAGGATATTTTAGACAATGTTGGACAAAGCATATTTCAGAGGATACTGTCATTGTTCTCTGATAGTTTCAGAACAGATGAGTCTGATGACATACATGCTGCTTTGGCGCTAATGTATGGATATGCTGCAAAGTATGCCCCATCAACAGTTATTGAAGCTAGAATAAATGCCCTTGTTGGCACCAACATGCTCTCTCGACTTCTTCATGTGCGTCACCCTAGAGCAAAGCAAGCTGTCATCACAGCAATTGATTTATTAGGTAATGCGGTCATTAATGCTGCTGAAAGTGGTTCGCCATTTCCATTGAAAAGAAGGGACCAACTGcttgattatattttaactttgatGGGCCGAGATGATGAAGATGGTTTTTCTGATTACAATGATCTTTTGCGTACTCAGgccCTTGCTATAAGTGCTTGCACTACGTTGGTCTCTGTGGAACCAAAACTAACAGTTGAAACTAGAAACCATGTAATGAAGGCCACATTGGGGTTCTTTGCTATACCAAATGATCCGGTTGATGTTGTCAATTCCCTTATAGAGAACTTGATTACTCTTTTATGTGCAATTCTTCTCACTGGtGGAGAAGATGGAAGAAGTCGAGCAGAGCTGCTAATGCTTATCTTGAGGCAAATTGATCAATTTGTCTGTTCTCCTGTTGAGTATCAGAGGAAAAGGGGCTGTCTTGCTGTCCATGAGATGCTTCTAAAGTTTCGGATGATTTGTGTTAGTGGGTATTGTGCACTGGGCTGCCATGGGAGTTGTGCACATAACAAGCAAATTGAACGTGCTCTATATGGGAATTTTTCAAAGCTACCATCTGCATTTGTATTGCCAAGTAGAGAAGCTTTGTGCTTGGGAGATAGGGTAATAATGTATCTTCCACGTTGTGCAGACACAAATTCTGAAGTCAGAAAAATATCAGCACAAATTCTTGATCTACTCTTCAGCATCTCTCTTTCACTTCCAAGACCTGCAGGTTCATCTATATCTACTGAAGATATAGAATTGTCGTACAGCGCATTATCTTCTCTTGAGGATGTTATAGCCATATTGAGGAATgATACTTCAATTGATCCATCAGAAGTTTTCAACAGGATTGTTTCCTCCCTCTGCATTCTGTTGACAAAGGATGAGCTGGTTGCTACACTGCATGGTTGCTCAGTGGCTTTATGTGATAAGATCAAGCAGTCAGCTGAAGGGGCTATTCAAGCTGTTGTTGAATTTGTTacaaagagagggagagaactGACTGAGATTGATATCTCAAGGACAACCCAATCATTGATCTCTGCCACTGTGCATGCAACTGACAAGCATTTGCGTGTGGAAACTCTTGGAGCTatttcttctttggCTGAAAACACTAGCCCAAAAACTGTTTTTGATGAAGTCCTGGCTACTGCTGGAAGGGATACAGTCACAAAGGATATATCTAGGTTACGTGGGGGATGGCCCATGCAGGATGCATTCTATGCATTTTCTCAGCACATGGTACTGTCAGTTTTGTTTCTAGAACATGTGATATCTATCCTTAGCCAGATTCCTATCCTTAAAGTTGATGTGGACAGAGTTGAGGATAGCCAGGTTGACAGTCATACAGAAGATGGCAAACTGCAAGCTGCAATTTTTGCTCTTACTGCTTTCTTCAGAGGTGGGGGAAAAGTTGGAAAAAGGGCTGTTGAACAAAACTATGCTTCTGTTCTTTCTGAGCTTACACTGCAACTTGGAAGCTGTCATGGTTTAACCTACTCCGGTCAGGATGAACCATTGAGGAATCTTCTTACTGCATTTCAGGCATTCTGTGAATGTGTTGGTGACCTTGAGATGGGCAAGATTTTGGCTAGAGATGGAGAACTATCGGAAAATGAGAGGTGGATTGGTCTCATTGGAGACATAGCAGGCTGCATATCTATAAAGCGACCAAAAGAGGTACAaaatatttgtctatttttgaaaaactcacTTGATCGACCCCAGAAATACCAAAGGGAAGCTGCAGCTGCTGCATTGTCAGAATTTGTTCGATATAGTGGTGGACTTGGTTCACTTTTGGAGCAAATGGTTGAGGCTTTATGTCGGCATGTATCAGATGAGTCTTCAACTGTTCGGCGATTATGTTTGCGAGGATTAGTACAGATCCCATTGATTCATATTCTGAAGTATACAACTCAAGTCTTGGGTGTTATATTAGCTCTACTAGATGATTCTGATGAATCCGTCCAATTAACAGCTGTGTCATGCTTACTGATGATTCTCGAATCTTCACCCGATGATGCAGTTGAGCCCATTTTGCTTAATCTTTCAATACGGCTTCGAAATCTTCAAACAAGCATGAATGCAAAGATGCGAGCCAGTTCTTTTGCAGTGTTTGGGGCACTAAGCAAATATGGAATTGGGGCACTAAATGAGGCATTTGTCGAGCAGGTACATGCTGCTGTTCCTCGCCTGGTCTTGCATCTTCATGATGAAGATGTTGGTGTCCGATTGGCCTGTCGGAATACCCTGAAACGAGTTTGCCCATTGATGGAAATTGAAGGATTGCTTGCCCTACTAAACACACACAGTTTCCTTTCTGATCATCGAAGTGACTATGAGGACTTTCTCCGAGACATTGCAAAGCAATTTACTCAGCATCTTCCCTCCAGAGTTGATAGTTATATGGCATCAACAGTGCAGGCTTTTGACGCACCATGGCCCATAATTCAGGCAAATGCTATATACTTCTGCAGCAGCATGCTCTCTCTATCTGACAATCAGCATATTTTAGCTGCCTATCATTCACAGGTCTTTGGTATGCTGGTGGGAAAAATGAGCCGATCACCCGATGCTGTCGTTAGAGCAACGTGTTCTGCTGCTCTGGGCTTGTTGCTGAAATCCTCCAATTTATGTTCATGGAGAGCAGTTCAACTCGATCGATTTGACTCAACACCACGGAACCATGATGCAGAGTCCACGAAAAACTAG 3342 0.4117 MKAYVSDTEDLKQDPSYQDTWDDMIINFLAESLDVIQDADWVMSLGNVFAKHYELYASDDQHTALLHRCLGILLQKVNDRAYVRDKIDWMYNQANIAVPTNRLGLAKAMGLVAASHLDTVLEKLKDILDNVGQSIFQRILSLFSDSFRTDESDDIHAALALMYGYAAKYAPSTVIEARINALVGTNMLSRLLHVRHPRAKQAVITAIDLLGNAVINAAESGSPFPLKRRDQLLDYILTLMGRDDEDGFSDYNDLLRTQALAISACTTLVSVEPKLTVETRNHVMKATLGFFAIPNDPVDVVNSLIENLITLLCAILLTGGEDGRSRAELLMLILRQIDQFVCSPVEYQRKRGCLAVHEMLLKFRMICVSGYCALGCHGSCAHNKQIERALYGNFSKLPSAFVLPSREALCLGDRVIMYLPRCADTNSEVRKISAQILDLLFSISLSLPRPAGSSISTEDIELSYSALSSLEDVIAILRNDTSIDPSEVFNRIVSSLCILLTKDELVATLHGCSVALCDKIKQSAEGAIQAVVEFVTKRGRELTEIDISRTTQSLISATVHATDKHLRVETLGAISSLAENTSPKTVFDEVLATAGRDTVTKDISRLRGGWPMQDAFYAFSQHMVLSVLFLEHVISILSQIPILKVDVDRVEDSQVDSHTEDGKLQAAIFALTAFFRGGGKVGKRAVEQNYASVLSELTLQLGSCHGLTYSGQDEPLRNLLTAFQAFCECVGDLEMGKILARDGELSENERWIGLIGDIAGCISIKRPKEVQNICLFLKNSLDRPQKYQREAAAAALSEFVRYSGGLGSLLEQMVEALCRHVSDESSTVRRLCLRGLVQIPLIHILKYTTQVLGVILALLDDSDESVQLTAVSCLLMILESSPDDAVEPILLNLSIRLRNLQTSMNAKMRASSFAVFGALSKYGIGALNEAFVEQVHAAVPRLVLHLHDEDVGVRLACRNTLKRVCPLMEIEGLLALLNTHSFLSDHRSDYEDFLRDIAKQFTQHLPSRVDSYMASTVQAFDAPWPIIQANAIYFCSSMLSLSDNQHILAAYHSQVFGMLVGKMSRSPDAVVRATCSAALGLLLKSSNLCSWRAVQLDRFDSTPRNHDAESTKN 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0962 1113 SUPERFAMILY ARM repeat 421 1085 IPR016024 -
Ssu4g0962 1113 SUPERFAMILY ARM repeat 122 439 IPR016024 -
Ssu4g0962 1113 PANTHER MAESTRO-RELATED HEAT DOMAIN-CONTAINING 1 1084 IPR045206 -
Ssu4g0962 1113 PANTHER MAESTRO HEAT-LIKE REPEAT FAMILY MEMBER 1 1 1084 - -
Ssu4g0962 1113 Pfam non-SMC mitotic condensation complex subunit 1 808 922 IPR032682 -
Ssu4g0962 1113 Gene3D - 776 1088 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0962 K24816 - gmx:100800961 2069.66