Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0958 ATGACTTCCGAGGCACCACAGCTACACTTGGTCTTGTTTCCATTGATGGCCCCAGGCCACATGATCCCCATGATGGACATCGCAAAAATATTGGTGCACCGCAATGTTATTGTGACCGTAGTCACAACGCCACATAATGCGGCTCGTTTCACATCGATCTTTGATCGTTATATTGAGTCCAGGTTTCCGATTCGATTGATTCAACTTCAATTCCCATGTGAAGAAGCCGGAGTACCAGATGGGTGTGAGAATCTCGATATGGTGCCTTCACTTGGCACGGCCGTGAGTTTCTTCAAAGCAACAAACCTTCTACAACAACCAGTGGAAAAACTCTTTGAAGAGTTAGCACCACCACCAAGCTGCATAATCTCTGATAGGTGTTTGCCATTTACAGCCCAAATCgccaaaaaattcaatattccCAGGATTTCTTTTGTGGGAGTCAGTTGCTTTTATCTCTTGTGCCTGCATAATATACGCATCTATAATGTTAGGGAGAGTGTAACATCTGAGTCAGAGTACTTTGTTTTGCCTGGGTTCCAGAATCGAATTGCACAATTCTGTTGTGTGAACTGTGAAGATCCAAAACCTAACCCCCGTGAGCCTATCCATCGTGACCCCGTCCGTCGGCGCCGTCGAGCAAAGGCCGTCGTGCAAGGCTGTTGTCCACTCGTTGAAATCGTCGTCAGCCCATCCCTGCAGCGGCGTGAAAATTGTTGTCTCTGTATCTCATTTTCGTTCCTCCCTGCGCATCTAAGTGCTGTCTGTTGTAGGGAGGTTGATTCTCTCTATCCATGCTTGCTCTTGGTTGTGCTGAGTGCTGGATATAATGTAGAGTTTTTTGGTTGTGCTGACTGCTGGATATAA 867 0.4579 MTSEAPQLHLVLFPLMAPGHMIPMMDIAKILVHRNVIVTVVTTPHNAARFTSIFDRYIESRFPIRLIQLQFPCEEAGVPDGCENLDMVPSLGTAVSFFKATNLLQQPVEKLFEELAPPPSCIISDRCLPFTAQIAKKFNIPRISFVGVSCFYLLCLHNIRIYNVRESVTSESEYFVLPGFQNRIAQFCCVNCEDPKPNPREPIHRDPVRRRRRAKAVVQGCCPLVEIVVSPSLQRRENCCLCISFSFLPAHLSAVCCREVDSLYPCLLLVVLSAGYNVEFFGCADCWI 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0958 288 PANTHER GLYCOSYLTRANSFERASE 7 185 - -
Ssu4g0958 288 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 185 - -
Ssu4g0958 288 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 229 - -
Ssu4g0958 288 Gene3D Glycogen Phosphorylase B; 6 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0958 Ssu-Chr4 15249017 15253217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0958 6 184 Glycosyltransferase AT2G36760 54.444 1.12e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0958 K13496 K22771 gmx:100777426 314.694