Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0955 ATGGCTCCCCAAGAACAGCAACTCCACTTTGTCTTGTTTCCATTGATGGCCCAAGGCCACATGATCCCCATGATGGACATTGCAAAAATATTGGTGCACCGCAACGTTATTGTGACAGTAGTCACAACACCACATAATGCAGCCCGTTTCACGTCAATCTTTGACCGTTATATTGAATCTGGTTTTCAAATTAGATTAGTTCAACTTCAATTCCCATGCAAAGAAGCTGGTGTACCAGATGGATGCGAGAATCTCGATACGATACCTTCACTTGGCATGGCCGCGGGTTTCTTTAATGCAACAAGCTTTCTACAGCAACCAGTGGAAAAACTATTTGAAGAGTTAGCACCACCACCAAGCTGCATAATCTCTGATATGTGTTTACCATATACAAACCACATTgctagaaaatttaatattccCAGGATTTCTTTTGTTGGAGTAAGTTGCTTCTATCTCTTATGCATGTCTAATATACGCATCCATAATGTTATGGACAGCATAACTACTGAATTGGAGTACTTTGTTGTGCCTGTCAAAGTTTTGGCTTGGTTTTTCTATGAAGTTGGATCATATACGACACTTCTTGTTAATACCAGCTAG 603 0.3947 MAPQEQQLHFVLFPLMAQGHMIPMMDIAKILVHRNVIVTVVTTPHNAARFTSIFDRYIESGFQIRLVQLQFPCKEAGVPDGCENLDTIPSLGMAAGFFNATSFLQQPVEKLFEELAPPPSCIISDMCLPYTNHIARKFNIPRISFVGVSCFYLLCMSNIRIHNVMDSITTELEYFVVPVKVLAWFFYEVGSYTTLLVNTS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0955 200 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 179 - -
Ssu4g0955 200 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 167 - -
Ssu4g0955 200 Gene3D Glycogen Phosphorylase B; 5 199 - -
Ssu4g0955 200 PANTHER GLYCOSYLTRANSFERASE 7 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0955 Ssu-Chr4 15198995 15200850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0955 8 178 Glycosyltransferase AT2G36800 56.395 4.90e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0955 K13496 K22771 gmx:100781486 338.191