Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0952 ATGGACTCAACACCTCTTAACCACCTCCACTTTGTGTTCATCCCCTTAATGGCCCCAGGTCATCTTCTCTCCATGGTAGACATGGCCAAATTGTTTGCACGACGCAAAGTGAAGGTGAGCATAGTCACCACACCCCTCAACTCCATCCAATTCCAAGCTAGCATAGACAGAGAGATTCAATCTGGGTCACCCATCCAAATTCTACATGTTCAATTTCCATGCGCTGAGGCTGGGTTACCAGAGGGATGTGAGAGCGTAGACACTCTGCCTTCCATGGATCTCCTAAACAACTTCAACATCGCTATGGAACTGTTGCAGCGGCCACTAGAAGAGCTACTTGAAAAGCAAAGACCCTTTCCAAGTTGCATAATTGCCGACAAGCATATCATATGTGTGGCTCGTGTTGCCGACAAGTTGAATGTCCCTAGAATAATATTCGACGGGAAGAATTGTTTCTTTCTCCTATGCAACCACAATTTAAACAAGTGTAAGGTCCACGAAGCTGTGTCTGGTGAAGAGAAATTTCTTGTCCCCGGAATGCCCCACAGAATTGAACTGCGAAGATCTCAACTCCCCGGGATATTGAATCCTGGCACGGACCTGAAGTTGCACGCTTATCGCGagaagGATGAGGGAATGACATCATAG 648 0.466 MDSTPLNHLHFVFIPLMAPGHLLSMVDMAKLFARRKVKVSIVTTPLNSIQFQASIDREIQSGSPIQILHVQFPCAEAGLPEGCESVDTLPSMDLLNNFNIAMELLQRPLEELLEKQRPFPSCIIADKHIICVARVADKLNVPRIIFDGKNCFFLLCNHNLNKCKVHEAVSGEEKFLVPGMPHRIELRRSQLPGILNPGTDLKLHAYREKDEGMTS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0952 215 PANTHER GLYCOSYLTRANSFERASE 7 210 - -
Ssu4g0952 215 PANTHER GLYCOSYLTRANSFERASE 7 210 - -
Ssu4g0952 215 Gene3D Glycogen Phosphorylase B; 7 209 - -
Ssu4g0952 215 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0952 Ssu-Chr4 15161357 15163175 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0952 9 202 Glycosyltransferase AT2G36780 45.408 4.52e-52 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0952 K13496 - gmx:100820150 365.925