Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0946 ATGGCTCTGCCACTTAAGCAGCCTCATTTTGTGTTAGTTCCACTTCTGGCTCAAGGCCACATGATCCCCATGATAGACATGGCAAGGATTTTGGCAGAGAGAGGGGTTATTATCACATTGGTAAGTACCCCTTTCAATGCCTCAAGATTTGAGCAAACAATTATTAGAGCAGCAAAATCCGGGCTTCCAATTCAACTCCTACAAATCCCATTTCCATGCCAAAAAGTGGGACTTCCATTTGGCTGCGAGAACCTTGATACTTTACCATCAAGAAACCTACTCAGAAACTTCTATATTGCCCTTGACATGATGCAAGAACCTTTGGAGCAGTACCTCCAAAATCATCCTTCTCCTCCAAGTTGCATCATATCAGATAAATGCCTCTCTTGGACTTCTATAACAGCCAAGAAGTTCAATATTCCGAGGCTTGTCTTTCATGGGATGTCCTGTTTTTCATTACTTAGCTCCTATAATATCAAGCTCTACAATTCTCATCTTTCTTGCTCTTCTGACTCAGAACCTTTTCTCATACCAGGACTGCCTCAGAGGATTGAGATAACCAAAGCACAACTCCCCGGAGCATTTTTCGCCCTGCCTGATTTGGATGATTTTAGACACAAAATGTATTAA 630 0.4206 MALPLKQPHFVLVPLLAQGHMIPMIDMARILAERGVIITLVSTPFNASRFEQTIIRAAKSGLPIQLLQIPFPCQKVGLPFGCENLDTLPSRNLLRNFYIALDMMQEPLEQYLQNHPSPPSCIISDKCLSWTSITAKKFNIPRLVFHGMSCFSLLSSYNIKLYNSHLSCSSDSEPFLIPGLPQRIEITKAQLPGAFFALPDLDDFRHKMY 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0946 209 Gene3D Glycogen Phosphorylase B; 5 209 - -
Ssu4g0946 209 PANTHER GLYCOSYLTRANSFERASE 2 208 - -
Ssu4g0946 209 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 195 - -
Ssu4g0946 209 PANTHER PHOSPHATIDYLCHOLINE:DIACYLGLYCEROL CHOLINEPHOSPHOTRANSFERASE 1-RELATED 2 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0946 Ssu-Chr4 15071311 15073113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0946 9 208 Glycosyltransferase AT2G36780 48.756 4.30e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0946 - - ccaj:109818058 341.658