Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0917 ATGGGGGGTGAAACGGTGAATGGGTCATGGTTCAGTGCTTTGTGGCCAGTCTCTCGCAAGAGTGCATCAGATAACAAGGCAGTAGTGGGAGTTTTGGCATTAGAAGTTGCAGGGTTAATGTTGAAGGTGGTTAATTTATGGCAGTCTTTGAGTGATGGGGAGGTATTGAGTCTGAGGGAAGGGATACTGAACTCTGTTGGAGTCAAAACGCTGGTGTCTGACAATGATGATTACTTGATGGAACTTACTTTGAATGAGATACTCGATAACTTTCAATCTCTAGCTCGGTCTGTGGCTAGGTTGGGTAAGAAGTGCGTGGATCCAGTTTATCATCGTTTTGAGCATTTTGTTCATAACCCggctcaaaattattttcaatggtCTGGGTGGGAATATAGGTGGAAAAAGATGGAGAGGAAAgtgaagaaaatggaaaaatttgtTGCCGCTATGACACAGTTTTCCCAAGAGGTTGAGGTGCTAGCAGAGGTTGAACAGACTTTCCGGAGAATGCAGGCAAATCCAGAATTGCATCGGGTGAAATTGCTTGAGTTTCAGAAGAAGGTCATGTTGCAGCGCCAGGAAGTGAGGAATCTCAGAGACATGTCTCCATGGAATAAAAGTTATGATTATGTTGTCCGGTTGTTGGCAAGATCACTATTTACAATCCTGGAGAGGATCATACTTGTCTTTGCAAATAATCACCCAACTGTACAGCAACAGAATGATTCTCAGCATATGAATGCTAACAATCTTCTGCGAAGTCATTCCTTTTCTGTTCTTATGCATTCTTCTGTTCATCCTTCAGAGTATGATCTCTATGGCGGCTTCAATTCAGGACCTGTTGTGGGGAAGCCGGTATCAAAATCAGGCTTTTTAGTTGACAAGggcaaaagaaagaagaaacagCAGCAAGCTCTTCATGAACCAGCTTTATGCAGAAAGAACACACCTTCAGAAGGCAAGCAGTTAGGACATATTGTGGCCTTAAAAGGTTGTATGTCTGCTGCAAACAATTCTCCTGTTATGCAGAGCTGTATGCAGACAAATGGTGGTTCCATGAGGTTGACtgattataatttgaaatctattgataaaatgaaaacagTGGATAAGTTATCTCTCTCCAAcagaattagaatatattctaaattatccTTCAATAACCGGTTAAAGCCAGCTTCATTTACCCTTGGTGATGCGGCTCTAGCCCTACATTATGCAAATATGATTGTGTTGATTGAGAGGATGGTGTCATCACCTCACCCGATTAATCTTGATACAAGAGATGACCTGTACAATATGCTTCCAACCACTATAAGAGCTGCTCTGAGGGCTAAGCTTAAGTGCCATGCAAAAGGTAAATCTTCCTCCGTTCGTCACGACACAAACCTTGCCGCCGAATGGAGTCCGGTACTCGCACAGATGTTGGAATGGTTGGCTCCGCTGGCACAAAACATGATAAGCTGGCATTCTGAGAGAAATTTTGAGAAGGAGCactcaattttaaaagcaaatgtTTTACTTGTCCAAACTCTTTACTTTGCTAATCAAGCAAAAACTGAGGCTGCAATAATTAATCTTCTTGTAGGTCTCAACTATGTGTGCAGGATTGATACAAAAGTTGGCACAAGGGATACTACCCTAGATTGTGCTAGCACTAGATCTTTTAATGGTGTTCGTTTGAGAAAGAATGGAATGTACAATGAATTTTTATAG 1719 0.3915 MGGETVNGSWFSALWPVSRKSASDNKAVVGVLALEVAGLMLKVVNLWQSLSDGEVLSLREGILNSVGVKTLVSDNDDYLMELTLNEILDNFQSLARSVARLGKKCVDPVYHRFEHFVHNPAQNYFQWSGWEYRWKKMERKVKKMEKFVAAMTQFSQEVEVLAEVEQTFRRMQANPELHRVKLLEFQKKVMLQRQEVRNLRDMSPWNKSYDYVVRLLARSLFTILERIILVFANNHPTVQQQNDSQHMNANNLLRSHSFSVLMHSSVHPSEYDLYGGFNSGPVVGKPVSKSGFLVDKGKRKKKQQQALHEPALCRKNTPSEGKQLGHIVALKGCMSAANNSPVMQSCMQTNGGSMRLTDYNLKSIDKMKTVDKLSLSNRIRIYSKLSFNNRLKPASFTLGDAALALHYANMIVLIERMVSSPHPINLDTRDDLYNMLPTTIRAALRAKLKCHAKGKSSSVRHDTNLAAEWSPVLAQMLEWLAPLAQNMISWHSERNFEKEHSILKANVLLVQTLYFANQAKTEAAIINLLVGLNYVCRIDTKVGTRDTTLDCASTRSFNGVRLRKNGMYNEFL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0917 572 Pfam Protein of unknown function (DUF668) 397 488 IPR007700 GO:0045927
Ssu4g0917 572 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Ssu4g0917 572 PANTHER BNAC09G50660D PROTEIN 3 567 - -
Ssu4g0917 572 PANTHER PLANT/T32M21-140 PROTEIN 3 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0917 Ssu-Chr4 14611132 14612850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0917 - - gmx:100809482 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0917 4 14611132 14612850 Ssu4g0917 4 14611132 14612850 ECH