Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0913 ATGGCCGCAGCATCTCTCACATTGTCCAGGCTTATCTCTTCCACCACCGCCTCCTCGCTCTTCCCACCCAAAACCCTCCCTTCCAAACTCTCCCTCCGCCGCACCCCAAGGCCCCTCAGGTTCTCCTCCTCCACCATCTCCGCCGCCATCGCCGTCGGCGACAGGCTCCCGGAAGCAACCTTCTCGTACCTGGACTCGGCCGGCGAGGTGAAGACGACGACGGTGTCGGAGCTGACGAAGGGGAAGAAGGCGGTGCTGTTCGCGGTCCCCGGCGCGTTCACCCCGACGTGCTCGCGGAAGCACGTGCCGGGCTTCGTGGAGAAGTCGGGGGAGCTGAGGGCGAAAGGGGTGGACACCATTGCGTGCATTTCGGTCAACGACGCCTTCGTCATGAAGGCGTGGAAGGAGGACCTCAAGGTCAACGACGAGGTGCTCCTGTTGTCGGATGGAAACGGAACGTTCACGAGAGCCATCGGGTGCGAGCTCGACCTCAGCGACAAGCCCGTTGGGTTGGCCGTTAGGTCTAGGCGCTACGCGCTCTTCGCCGAGGATGGGGTTGTTAAGCTCTTTAATTTGGAGGAAGGGGGTGCCTTCACTTTCAGCAGCGCTCAGGATATCCTTGATGTCCTTTGA 633 0.6161 MAAASLTLSRLISSTTASSLFPPKTLPSKLSLRRTPRPLRFSSSTISAAIAVGDRLPEATFSYLDSAGEVKTTTVSELTKGKKAVLFAVPGAFTPTCSRKHVPGFVEKSGELRAKGVDTIACISVNDAFVMKAWKEDLKVNDEVLLLSDGNGTFTRAIGCELDLSDKPVGLAVRSRRYALFAEDGVVKLFNLEEGGAFTFSSAQDILDVL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0913 210 Gene3D Glutaredoxin 48 210 - -
Ssu4g0913 210 Pfam Redoxin 52 204 IPR013740 GO:0016491
Ssu4g0913 210 CDD PRX5_like 52 207 IPR037944 -
Ssu4g0913 210 ProSiteProfiles Thioredoxin domain profile. 50 210 IPR013766 -
Ssu4g0913 210 PANTHER PEROXIREDOXIN 30 209 IPR037944 -
Ssu4g0913 210 PANTHER PEROXIREDOXIN 30 209 - -
Ssu4g0913 210 SUPERFAMILY Thioredoxin-like 50 208 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0913 Ssu-Chr4 14557150 14557782 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0913 - - gmx:100783307 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0913 4 14557150 14557782 Ssu4g0913 4 14557150 14557782 ECH