Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0895 ATGGAGGAAGAAACCAACCACCACACAATAGATATCTGGAAGGCAATAGACAGAGAGAGGCTGGCTACGATGGAGCTCAAGCTTTCGGAGAATCCAAAGTTGCTAAGCAAAGCCGCGGGGAACAGATCGTGTTGCATCTTCAGGGTACCGCAGAGCCTAATCGAGGCAAACGGAAAAGCCTACCAACCTCGTATCGTGTCCATAGGACCCTACCACCGTGGCCAACCTCGCCTCAACATGATCGAGGAACACAAGTGGCGTTACCTCGGTTCCCTTCTCTCAAGAACACACACCACAGGTTTAAGCCTAGAGGATTTATTCAAAGCCATCGCCCCTTTAGAATCAGAAGCCAGAGAATGCTACTCCGAATCCATCCACCTCGACTCTCACGACTTCACCGAAATGATGATCCTCGACGGGTGTTTCATCATTGAACTCTTCCGCAAAGTCGCCAGCAGACTTTCTCAAGCTCGAAAACCAAATCCCTTTCTTCATTCTGAACCAACTGTTCGAACAAACAAAACCACCCGAGAAAAGTCAACGGCGACACTCTCAACTCTCGCCATGCTGTTCTTCAACAACTCGCTGCAAAGGCCAGACGAAGCCGTCGTCCAAAACGACACGAAGCGAAGGCATTTACTCGACCTGGTCCGTTCGAGTTTCATTCCGAACGAATTGGAAACGGAGCCGCGAAAAAGGGTGGTCGCGCCGACCCACGTGATCCTCTGCGTCTCGAAGCTTCGACGCGCCGGGGTTAAGATTAGTCGCGGCAAGGACAGCGACAGCTTCCTGCACGTGACGTTCAGGCACGGCGTGATTGAGATGCCGACCCTCACGGTGGACGATTTCATGAGCTCTTTTCTGCTGAACTGCGTGGCGTTTGAACAGTGCTACGGCGGTTTCTGGAAGCAGTTCACGGCCTATGTTACCCTCTTGGACTGTCTCATAAACACGTACAGGGACGTTGAGTATTTGTGCGATCGGAACGTGATTGAGAACCACTTCGGGACGGAGGGGGAAATGGCGAGTTTCATCAACAACGCGGGAAGAGACGTGGCGGTTGATTTGGATCTGTGTTATTTGTCTCAGTTGTTCAACGATGTTCACAAATATTATAGAAGTAGTTGGCATGTGCAGTTGGCTAGTTTCAAGTACACTTATTTTGATACGCCCTGGTCGTTTATCTCAGCTTTAGCTGCGCTCGTATTGTTGGTTCTTACTGTGGCTCAGACCTACTTTGCTGCTTATCAGTATTTTGACAATCCAAATTCTTCTTGA 1278 0.4992 MEEETNHHTIDIWKAIDRERLATMELKLSENPKLLSKAAGNRSCCIFRVPQSLIEANGKAYQPRIVSIGPYHRGQPRLNMIEEHKWRYLGSLLSRTHTTGLSLEDLFKAIAPLESEARECYSESIHLDSHDFTEMMILDGCFIIELFRKVASRLSQARKPNPFLHSEPTVRTNKTTREKSTATLSTLAMLFFNNSLQRPDEAVVQNDTKRRHLLDLVRSSFIPNELETEPRKRVVAPTHVILCVSKLRRAGVKISRGKDSDSFLHVTFRHGVIEMPTLTVDDFMSSFLLNCVAFEQCYGGFWKQFTAYVTLLDCLINTYRDVEYLCDRNVIENHFGTEGEMASFINNAGRDVAVDLDLCYLSQLFNDVHKYYRSSWHVQLASFKYTYFDTPWSFISALAALVLLVLTVAQTYFAAYQYFDNPNSS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0895 425 Pfam Plant protein of unknown function 46 160 IPR004158 -
Ssu4g0895 425 Pfam Plant protein of unknown function 178 406 IPR004158 -
Ssu4g0895 425 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 4 155 IPR004158 -
Ssu4g0895 425 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 178 420 IPR004158 -
Ssu4g0895 425 PANTHER - 4 155 - -
Ssu4g0895 425 PANTHER - 178 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0895 Ssu-Chr4 14153805 14155147 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0895 - - gmx:100789486 647.506