Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0890 ATGGCTATAATCCTGTCCACATGGATGCTTGAGATTAGCACTCCTTCAATTGAGGCTCAACTTGGCATAGATTTTGCAGAGATTTATGCCAACTCTACTCTTTACCGAAGGAATCAAGAGCTTATCAAAGAGCTCAGTACTCCTCCACCAGGCACCAATGACTTGCATTTCCCAACCAAATATTCCCAAACATTCTTTGTGCAGTGCAAAGCTTGTTTTTGGAAACAGTATTGGTCATATTGGAGAAATGCTCCGTACAACGCCGTTCGATACTTCTTCACAATAGCCATTGGGATAATCTTTGGTTTAATCTTCTGGAATAAAGCCAAAAATAtCCAAAAGCAACAAGATTTATTGGATCTTTTAGGAGCCATGTACACTGCTGTGATGTTCCTTGGAACCATGAACACTATGGGAGTGCAGCCAATTGTTGACATAGAAAGAACTGTATTGTATCGTGAAAGAGCGGCAGGAATGTATTCAACTCTGACCTATGCAATTAGTCAGGTGGCAGTAGAGGCAATTTATAATGCCATTCAAACGACCATTTACAGTGTCATCATCTACTCCATGATGGGGTTTGAATGGAAGGCGGGGAAATTTCTTTCGTTCTACTACTTCATGCTTATGTGTTTAATCTACTACACGCTGTATGGGATGATGATTGTTGCCCTAACCCCGAATTACCAAATTGCTTCCATTTGTAATTCCTTCTTCTTGGGCGTCTGGAACACGTTCTCTGGCTTTATCATTCCTAGAACGCAAATTCCTGTATGGTGGAGATGGTACTATTGGGCTACTCCTAATGCTTGGACACTTTATGGCATTGTTACCTCTCAACTTGGTGATGAAACTGCACAAGTGGAAATCCTAGGAGCAGAAAACATGGGGCTTAAGGAACTACTTAAGGAAAGCTTGGGTTATGACTATCACTTCCTCCCAGTGGTTGCTGTTGTTCACTTGGGCTGGGTTctccttttcttgtttgtttttgccTATAGCATAAAATTCCTGAACTTCCAAAAAAGATGA 1032 0.4041 MAIILSTWMLEISTPSIEAQLGIDFAEIYANSTLYRRNQELIKELSTPPPGTNDLHFPTKYSQTFFVQCKACFWKQYWSYWRNAPYNAVRYFFTIAIGIIFGLIFWNKAKNIQKQQDLLDLLGAMYTAVMFLGTMNTMGVQPIVDIERTVLYRERAAGMYSTLTYAISQVAVEAIYNAIQTTIYSVIIYSMMGFEWKAGKFLSFYYFMLMCLIYYTLYGMMIVALTPNYQIASICNSFFLGVWNTFSGFIIPRTQIPVWWRWYYWATPNAWTLYGIVTSQLGDETAQVEILGAENMGLKELLKESLGYDYHFLPVVAVVHLGWVLLFLFVFAYSIKFLNFQKR 343
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0890 343 Pfam ABC-2 type transporter 68 280 IPR013525 GO:0016020|GO:0140359
Ssu4g0890 343 PANTHER ATP-BINDING CASSETTE TRANSPORTER 6 343 - -
Ssu4g0890 343 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 6 343 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu4g0890 Ssu-Chr4 13966260 13968079 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0890 K08711 - gmx:100790545 623.624