Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0862 ATGACGGAATTATCCCGACGGGACAGAGATAGCTCATCTTCAATGGCTTCGAAGGCGATGGGCTTGGTAGCGGAGAAGATAGGGGCGGCGGCGCGGCGCCAAGCCGTGACGTTAACGGACGCCGCCGCCTCGCGAATACGACAGTTGCTGCAGCAGCGTCAGAGGCCCTTCTTGAAGCTCGGAGTCAAGGCTCGCGGCTGTAACGGCTTATCCTACACCCTCAATTACGCAgATGAAAAAGGGAAGTTTGATGAGTTGGTTGAGGATAAGGGTGTTAAGATATTGATTGATCCAAAGGCCCTTATGCACGTCATTGGAACTAAAATGGATTTTGTAGATGACAAACTGAGATcggaatttatttttgtcaatccAAATTCTAAAGGCCAGTGTGGTTGTGGTGAATCTTTCATGACAACAACCAGTAGTGGAGCTTCTAAGCCATGA 447 0.4743 MTELSRRDRDSSSSMASKAMGLVAEKIGAAARRQAVTLTDAAASRIRQLLQQRQRPFLKLGVKARGCNGLSYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFVNPNSKGQCGCGESFMTTTSSGASKP 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0862 148 TIGRFAM TIGR00049: iron-sulfur cluster assembly accessory protein 36 138 IPR016092 GO:0016226|GO:0051536
Ssu4g0862 148 PANTHER IRON-SULFUR CLUSTER ASSEMBLY PROTEIN 14 147 - -
Ssu4g0862 148 ProSitePatterns Hypothetical hesB/yadR/yfhF family signature. 120 137 IPR017870 -
Ssu4g0862 148 Gene3D - 35 141 IPR035903 -
Ssu4g0862 148 SUPERFAMILY HesB-like domain 35 128 IPR035903 -
Ssu4g0862 148 PANTHER IRON-SULFUR ASSEMBLY PROTEIN ISCA-LIKE 3, MITOCHONDRIAL 14 147 - -
Ssu4g0862 148 Pfam Iron-sulphur cluster biosynthesis 36 135 IPR000361 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0862 K22063 - gmx:100777750 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0862 4 13503926 13507610 Ssu4g0862 4 13503926 13507610 ECH