Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0861 ATGGCAACCTGTTATACACCTTCGAATGTTAGAAATTCGGCTGGAGTGCTAGCTGTTGTTGGAGGGAGAACAATTTCTGAGAACCACGGTAACAGATCATGCTTGTTGAAAATTCAAGAGAACAAGTACTTGTTTGGGAACCGTAAGTGTGGTTCGTTTCAAGTGAAGTGCTCTTCGAATTCCCACAGCATCAGTCGCAAGGACCCTTTTCTGGATCTACACCCCGAGGTTTCAATGCTGAGAGGAGAAGGAGGCAGTGCATTGAACAACCCTAGGCCTAGAAAAGATGTAACAGGTGGAAACGTGGCTGAAAGTTTAGAAGCCACGTCGACTCCGAGTAACTACAATGAAGCTAAGATCAAAGTCATTGGTGTGGGTGGAGGCGGGTCAAACGCGGTCAACCGCATGATAGAGAGCTCCATGAATGGTGTGGAGTTCTGGATTGTTAATACTGATGTTCAAGCCATGAGAATGTCGCCGGTCATTCCTCAGAACCGGTTGCAAATCGGTCAGGAGCTCACACGAGGACTTGGTGCTGGTGGTAACCCTGAGATTGGCATGAATGCTGCCAAGGAAAGCAAGGAATCAATACAGGAGGCAGTTTATGGAGCTGATATGGTCTTTGTTACTGCTGGAATGGGTGGAGGAACTGGCACTGGTGGAGCTCCAGTTATTGCTGGTATCACAAAGTCAATGGGTATACTGACTGTTGGTATTGTCACAACCCCTTTTTCATTTGAGGGACGAAGAAGGGCAGTTCAAGCACAAGAAGGAATTGCAGCCTTAAGAGATAATGTTGATACGCTGATAGTTATTCCAAATGACAAACTGCTGACTGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCCGATGATATTCTTCGACAAGGTGTTCGTGGTATATCTGATATTATTACGATACCAGGATTGGTGAACGTAGACTTTGCTGATGTTCGAGCTATAATGGCCAATGCAGGTTCTTCACTTATGGGAATAGGAACTGCAACTGGGAAAACAAGGGCGAGAGATGCTGCATTAAATGCTATCCAGTCACCTTTACTAGATATTGGTATAGAAAGGGCTACTGGAATTGTATGGAACATAACTGGTGGAACTGATTTGACCTTGTTTGAGGTAAATGCTGCAGCAGAAGTTATATATGACCTTGTGGACCCCACcgctaatttaatatttggagCAGTAATAGATCCATCGCTCAGTGGTCAAGTAAGCATAACATTAATTGCAACTGGATTCAAGCGTCAAGAGGAAAGTGAAGGGAGGCCCGTACAGGCCAGTCAACTCACACAGGGAGATACCATTGGTATCAATCGGCGATCTTCCTCTTTCACTGATAGCAGTTTTGTTGAGATCCCTGAATTCTTAAAGAAGAAGGGGCGCTCACGTTATCCAAGAGCTTAG 1434 0.4463 MATCYTPSNVRNSAGVLAVVGGRTISENHGNRSCLLKIQENKYLFGNRKCGSFQVKCSSNSHSISRKDPFLDLHPEVSMLRGEGGSALNNPRPRKDVTGGNVAESLEATSTPSNYNEAKIKVIGVGGGGSNAVNRMIESSMNGVEFWIVNTDVQAMRMSPVIPQNRLQIGQELTRGLGAGGNPEIGMNAAKESKESIQEAVYGADMVFVTAGMGGGTGTGGAPVIAGITKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGTDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEGRPVQASQLTQGDTIGINRRSSSFTDSSFVEIPEFLKKKGRSRYPRA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0861 477 Hamap Cell division protein FtsZ [ftsZ]. 115 446 IPR000158 GO:0003924|GO:0005525
Ssu4g0861 477 SMART Tubulin_4 119 313 IPR003008 GO:0005525
Ssu4g0861 477 ProSitePatterns FtsZ protein signature 2. 205 226 IPR020805 GO:0005525
Ssu4g0861 477 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 2 475 - -
Ssu4g0861 477 TIGRFAM ftsZ: cell division protein FtsZ 110 436 IPR000158 GO:0003924|GO:0005525
Ssu4g0861 477 SMART Tubulin_C_4 315 432 IPR018316 -
Ssu4g0861 477 CDD FtsZ_type1 130 422 IPR000158 GO:0003924|GO:0005525
Ssu4g0861 477 Gene3D Tubulin/FtsZ, GTPase domain 108 328 IPR036525 -
Ssu4g0861 477 Gene3D - 329 438 IPR037103 -
Ssu4g0861 477 Pfam Tubulin/FtsZ family, GTPase domain 119 280 IPR003008 GO:0005525
Ssu4g0861 477 Pfam FtsZ family, C-terminal domain 330 424 IPR024757 -
Ssu4g0861 477 PRINTS Cell division protein FtsZ signature 206 226 IPR003008 GO:0005525
Ssu4g0861 477 PRINTS Cell division protein FtsZ signature 297 319 IPR003008 GO:0005525
Ssu4g0861 477 PRINTS Cell division protein FtsZ signature 234 255 IPR003008 GO:0005525
Ssu4g0861 477 PRINTS Cell division protein FtsZ signature 320 341 IPR003008 GO:0005525
Ssu4g0861 477 SUPERFAMILY Tubulin nucleotide-binding domain-like 118 316 IPR036525 -
Ssu4g0861 477 SUPERFAMILY Tubulin C-terminal domain-like 312 426 IPR008280 -
Ssu4g0861 477 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 2 475 IPR045061 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0861 Ssu-Chr4 13489182 13495964 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0861 K03531 - gmx:100793382 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0861 4 13489182 13495964 Ssu4g0861 4 13489182 13495964 ECH