Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0860 ATGGCTCACCAATCCTCTGCTGAATCTGATGACCAGATTCCTACTCAGCCATTGGACCTAAACAGTCCCCATCCATCTAAAGATATCATCAACATGGAGCAACAAGAAGAAGACCCCTTATCCTTGAGCAACCTTAACCATGATGATAGAGATAAGGATGTTACACAAAACCCATCTTCTTCAACAACCCTTCTTTGCAACGAGGAGAAAATAGCATTACAGGAGCCTGCAATAACGGATGTTGCAAAAGAAAGTAGTGCACCAGAGGCTTTAGCAGAGGATAGTGGACGCGAGAGGCTGAAGCGGCATAGAGTTGAAGTAGCTGGAAGAGTTTGGATTCCTGATATATGGGGTCAGGAGGACCTGTTGAAGGATTGGATAGATTGCACTGCATTTGATGCTCCTTTAGTTCCGAGCAGAATCTCCACCGCACGAGAGGCTTTGGTTGAAGAGTGTACAAGAGCCAATGCTGCTGGACTAAGAATAGAGAACAGGTGTTAG 501 0.4551 MAHQSSAESDDQIPTQPLDLNSPHPSKDIINMEQQEEDPLSLSNLNHDDRDKDVTQNPSSSTTLLCNEEKIALQEPAITDVAKESSAPEALAEDSGRERLKRHRVEVAGRVWIPDIWGQEDLLKDWIDCTAFDAPLVPSRISTAREALVEECTRANAAGLRIENRC 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0860 166 PANTHER PROTEIN BIC1 8 166 - -
Ssu4g0860 166 MobiDBLite consensus disorder prediction 1 22 - -
Ssu4g0860 166 MobiDBLite consensus disorder prediction 1 97 - -
Ssu4g0860 166 PANTHER PROTEIN BIC1 8 166 IPR040374 GO:0009785
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0860 Ssu-Chr4 13473122 13473622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0860 - - gmx:100793911 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0860 4 13473122 13473622 Ssu4g0860 4 13473122 13473622 ECH