Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0852 ATGGGGAATTGCTTGGTGCTGCAAGAGAATGTTGTGAAGATCATGAAAACCGATGGGAAAATTCTTGAATACAAAACACCCATCAAAGTGGAACAGGTTTTGGTAGAATTTTCTGGCCATGCAGTATCCGAATCACTCCCAGTCCTGAGGTATCTTGAGCCAAACACTAAATTGCTCAGGGGGCAGTTATATTACCTAGTgccgctgccaccaccatcaccaaaaTCTAACAAGAAGGTGAGGTTTGCGGATCCAGAAGTTCAAGATGTAAAAAAAAGCAGCGTGGTTAGGATTAAGCTGGTTATTAGTAAGCAAGAGCTGCATGATATGCTGCAGAATGGAGGGTTTTCAGTTAGTAAGATGCTGTCTCTAGTTCATGAGGACAAGGATGAAGGTTTGTCTCAAAAGAGTGACGATATCTCTCAAGGGTGGAAACCAGCGTTGGAAAGTATACCTGAAGTAAAGTAG 468 0.3974 MGNCLVLQENVVKIMKTDGKILEYKTPIKVEQVLVEFSGHAVSESLPVLRYLEPNTKLLRGQLYYLVPLPPPSPKSNKKVRFADPEVQDVKKSSVVRIKLVISKQELHDMLQNGGFSVSKMLSLVHEDKDEGLSQKSDDISQGWKPALESIPEVK 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0852 155 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 153 - -
Ssu4g0852 155 MobiDBLite consensus disorder prediction 129 155 - -
Ssu4g0852 155 PANTHER EXPRESSED PROTEIN 1 153 - -
Ssu4g0852 155 Pfam PADRE domain 1 153 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0852 Ssu-Chr4 13426569 13427036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0852 - - gmx:100500042 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0852 4 13426569 13427036 Ssu4g0852 4 13426569 13427036 ECH