Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0850 ATGGGCTGCGTCTCCTCAAAACTCATCAAGAAAGACCTGAAGCAAGAAGAAGTCACTGTCACCACCAATGGCGGCGGTTACGTGAACCACGTGGTTTCTCTCACTTCCTCCACCTACGGAGCACTAATGTTGGACAAGgagcaacaacaacagcaacccaCCGTGGAAGAATCGAAAACTTCCCCTCCTCGGCCCCGCGAAGAACCCGAAGTCATCAACGCTTGGGAACTCATGGAGGGTCTCGAAGAGGGAGTGCCCATCTCCAAGAAAAGCCCCAAGTCCACCCCTTTCCTTCGCGGCTTCATCGCCACCGAAGCCAAAACCCCCTTGAAATTCCTCACCCAATTCGGGTCCCCCAAAACCCTCAAGAAGTTCTCAGGCAAGGAAAACAAAGTCCAACCCAATGCCGGTGTAAGACGCTTGGACTACACTTTTAGTCCCAAGGGAATTCTCAAACCCACCAATCCTTCTCCTCTAAAAGGGTCTCCTCCGGCTCGCGCTCGAAGGAACAGTTTCGGGAGTGACACGAAGAGGAGGAGTCCCACTCCTCTGTTTGATCCAGAGCTTCTCGCCTCTTACGAAAAGGAACTCTCCGAAGAGGAAGAGCAGATCAAGAGAATGGTCTGGGCCACCCCCAAAACCCGAAGAGTCAGAAAATCTTTGGAATCGCAATCACTTATTCACGCGTTTGAGGAAAAATGCCCCCCCGGAGGGGAAAATTGCGTTGTCGTTTACACCACCACGCTTCGGGGAATCAGAAAAACGTTTGAGGAATGCAATAAGGTTAGGTCCATTATTGAGTCCTACTGCGTGCACGTGGTGGAGCGTGACGTGTCCATGGATTCGGGGTTCAAGGAGGAGTTGCGGAAGCTGATGGGGACGAAGCAGGTTAAGGTTCCGGTTGTGTTTGTGAAGGGAAGGTTGGTTGGGGGAGCTGAGGAAGTTGTGAAGTTGGAAGAAGAGGGGAGATTGGGCGTTCTCTTTGAGGGGATACCCCACAAGGCGTTGGGTGAGTGTGAAGGGTGCGGTGGCGTGAGGTTTGTGATGTGCGTAGAGTGTAATGGGAGTTGTAAGGTTTTGGATGCGGAGAGCAAGAAGACTGTGAGGTGTGGCCAGTGTAATGAGAATGGATTGATTCAATGTCCTGTGTGTCGTTAA 1158 0.5095 MGCVSSKLIKKDLKQEEVTVTTNGGGYVNHVVSLTSSTYGALMLDKEQQQQQPTVEESKTSPPRPREEPEVINAWELMEGLEEGVPISKKSPKSTPFLRGFIATEAKTPLKFLTQFGSPKTLKKFSGKENKVQPNAGVRRLDYTFSPKGILKPTNPSPLKGSPPARARRNSFGSDTKRRSPTPLFDPELLASYEKELSEEEEQIKRMVWATPKTRRVRKSLESQSLIHAFEEKCPPGGENCVVVYTTTLRGIRKTFEECNKVRSIIESYCVHVVERDVSMDSGFKEELRKLMGTKQVKVPVVFVKGRLVGGAEEVVKLEEEGRLGVLFEGIPHKALGECEGCGGVRFVMCVECNGSCKVLDAESKKTVRCGQCNENGLIQCPVCR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0850 385 PANTHER EMB|CAB85507.1 1 384 - -
Ssu4g0850 385 Coils Coil 190 210 - -
Ssu4g0850 385 ProSiteProfiles Glutaredoxin domain profile. 230 335 - -
Ssu4g0850 385 Gene3D Glutaredoxin 238 329 - -
Ssu4g0850 385 SUPERFAMILY Thioredoxin-like 235 328 IPR036249 -
Ssu4g0850 385 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 1 384 - -
Ssu4g0850 385 CDD GRX_GRX_like 242 381 - -
Ssu4g0850 385 Pfam Glutaredoxin 242 309 IPR002109 -
Ssu4g0850 385 MobiDBLite consensus disorder prediction 146 185 - -
Ssu4g0850 385 MobiDBLite consensus disorder prediction 47 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0850 Ssu-Chr4 13393160 13394317 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0850 K17479 - gmx:100781497 653.669