Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0822 ATGCTGAGGCAAAACCGAAGCGGCATGGACATGATTCCTGGGAAGATCCGAAAGCGAGGGTGTTCCTCCTCGGCGTCGTCCTCGTCCTCCGTGCTGCACAACTACCGCTTCAAGAGGACCATTCTGGTGGGGAAGCGGGGCGGATCCAGTACGCCCGTGCCCACGTGGAAGCTCATGAGCTCGAGATCTCCGCTGCGGGCATTGGGCTCCCCCAAGTACCCGCCATCGCAGACCGGTGGCAAGGCGCGGCAGGCTCCGGTGTCGGCGAGGAAGCTCGCGGCGACGCTGTGGGAGATGAACGAGATTCCTTCGCCCAGCGTCAGGTCCAAGAAGGAGCTCAGAGGCAGAGAAAGGGTCGCCAGGTCCATGCGTTCTGGTTCTCTGCCTCCTCATTTGTCCGATCCATCACACAGTCCTGTGTCCGAGagGATGGATCGATCTGGAACTGGGAGTCGCCAGAAAAGAActccctctatttctcacaGGCCGAGGATCACTGAACATCATGTTGGCCAGTTGGATTCTCTTAGCAATGTTAGTCTCATGGAGATTGAAACCAGATCCCGAGCGCAGACCCCTGCTTCATCTGCTGTTGGAGTTAAAGCACGTTTAAAAGATGTTAGTAATGCTTTAACGACATCCAAAGAgctacttaaaattataaaccgTATGTGGGGTCATGAAGATCGTCCTTCATCTAGTATGTCCCTTATCTCAGCTTTGCATACTGAGCTGGAGAGGGCTCGCCTACAGGTCAATCAGCTTATCCAGGAACAGCGATCAGATCAGAATgagataaattatttgatgaagTGTTTTGCTGAAGAAAAGGCTGCTTGGAAAAACAAGGAGCAAGAAATTGTTGAGGCTGCAATTGAATCTGTTGCTGGAGAACTTGATGTAGAGAGGAAGCTCAGGAGACGATTTGAAAGCTTGAACAAGAAGCTTGGGAGAGAACTGGCTGACACCAAAGCATCTCTTCTTAAGGTGGTGAAAGAACTTGAAAGTGAGAAGAGAGCAAGAGAAATTATTGAGCAAGTATGTGATGAGTTAGCAAGAGATGCTGATGAAGATAAATCTGAGATTGAGAAACAAAAGAGAGTGTCTACAAAAGTTTGCGAAgaggtagagaaagagaaggaaataaTGCAGTTGACTGATAGGTTACGTGAGGAGAGAGCTCAGAAGAAACTCTCCGAGGCAAAATATCAGCTTGAGGAAAAGAATGCAGCTGTTGATATACTCAGGAACCAACTTGAAGCTTTTTTAGGAAGCAAACAAGTTAGAGAAAAAGGTCGCAGTTCCACTCACTTGAACGATGAAGAAATTGCTGCATATCTGGGCAGAAGCCGATTAGGTTCCCATCTCATTGAAGATAAAGAAGATGATGGAGGAGAGGTTGACAATGGAATAGAATGTGAGGAGGAATCTGCTGAAAGTGATCTGCATTCTATAGAGTTAAATAtggacaacaacaacaagagtTATAAGTGGACCTACCCTTCTGAAAGCAGATTCGATACAAGAAGATATCCAATTGAGGAAGAAGTGAAAGGTAGGAGGTCTACCTCTGGGAGGGCTTCAAGGAGAAGCACATCCCTGCAAAGGAGTATATCAGATGGAATGGAATGGGGAGTCCAAGCTGAGAAGCTTCAAAATTCAGGAGATGGGATAGATTGGGAAAGCTTTTATGAACTGGAAAAGCAAGCTCAAGGGAAAGGTTATGGGGATGAAATGCAAGGATATAAATCAGTGAAAGGTCTAAGGGATCAGATACTGGCCAGTTCCAGGCTTGGATCTTCCAGGGGTTATGCTAGTCCAACTAGACAATTTTCCCAGCCTTGGCCATCACGAGATCTCACAAATAACTTACAGGAAAGACCTGCTACAGCACAGGGCAGTGGTCTAAAATCAAGGTTAGGAGAAACCAGGGGTGAGGGCCAGAGTGTAAGGAAATCCAAAAGGTGA 1968 0.4517 MLRQNRSGMDMIPGKIRKRGCSSSASSSSSVLHNYRFKRTILVGKRGGSSTPVPTWKLMSSRSPLRALGSPKYPPSQTGGKARQAPVSARKLAATLWEMNEIPSPSVRSKKELRGRERVARSMRSGSLPPHLSDPSHSPVSERMDRSGTGSRQKRTPSISHRPRITEHHVGQLDSLSNVSLMEIETRSRAQTPASSAVGVKARLKDVSNALTTSKELLKIINRMWGHEDRPSSSMSLISALHTELERARLQVNQLIQEQRSDQNEINYLMKCFAEEKAAWKNKEQEIVEAAIESVAGELDVERKLRRRFESLNKKLGRELADTKASLLKVVKELESEKRAREIIEQVCDELARDADEDKSEIEKQKRVSTKVCEEVEKEKEIMQLTDRLREERAQKKLSEAKYQLEEKNAAVDILRNQLEAFLGSKQVREKGRSSTHLNDEEIAAYLGRSRLGSHLIEDKEDDGGEVDNGIECEEESAESDLHSIELNMDNNNKSYKWTYPSESRFDTRRYPIEEEVKGRRSTSGRASRRSTSLQRSISDGMEWGVQAEKLQNSGDGIDWESFYELEKQAQGKGYGDEMQGYKSVKGLRDQILASSRLGSSRGYASPTRQFSQPWPSRDLTNNLQERPATAQGSGLKSRLGETRGEGQSVRKSKR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0822 655 MobiDBLite consensus disorder prediction 106 121 - -
Ssu4g0822 655 MobiDBLite consensus disorder prediction 596 632 - -
Ssu4g0822 655 MobiDBLite consensus disorder prediction 516 541 - -
Ssu4g0822 655 MobiDBLite consensus disorder prediction 526 540 - -
Ssu4g0822 655 MobiDBLite consensus disorder prediction 66 86 - -
Ssu4g0822 655 MobiDBLite consensus disorder prediction 1 28 - -
Ssu4g0822 655 Coils Coil 238 265 - -
Ssu4g0822 655 PANTHER GB|AAF24581.1 9 655 IPR043424 -
Ssu4g0822 655 PANTHER PLANT/F24K9-26 PROTEIN 9 655 - -
Ssu4g0822 655 Coils Coil 375 418 - -
Ssu4g0822 655 Coils Coil 334 368 - -
Ssu4g0822 655 MobiDBLite consensus disorder prediction 142 156 - -
Ssu4g0822 655 MobiDBLite consensus disorder prediction 106 167 - -
Ssu4g0822 655 MobiDBLite consensus disorder prediction 596 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0822 Ssu-Chr4 12890537 12893689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0822 - - gmx:100783303 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0822 4 12890537 12893689 Ssu4g0822 4 12890537 12893689 ECH