Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0814 ATGTCAAAAGccttatttattcgtttttgTGGTTGTAGAAAACAGAAGAAAGCCATGAGCCGCAGAAATGGAAGTGGTCCAAAGCTTGACTTGAAGCTGAACCTGTCCCCACCGAGGGTTGAGCTGAGACTGGAGTCGCCGACGCGATCGGCGACGGTGTCACCGACCTCGCCACCGAGCTCGTGCGTGTCCTCGGAGCTGAACCAAGAGGACAAGAGTTATTCTAACAGCCCTGAAGCCACTTCCATGGTGCTTGTGGGTTGCCCTCGCTGCCTCATGTACGTGATGCTCTCTGAGGATGATCCCAAGTGCCCCAAATGCAAAAGCACTGTTTTGCTTGATTTCCTCCATGACACCAAAAACCCCACCATAAGGAGGAGTTAG 384 0.5052 MSKALFIRFCGCRKQKKAMSRRNGSGPKLDLKLNLSPPRVELRLESPTRSATVSPTSPPSSCVSSELNQEDKSYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHDTKNPTIRRS 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0814 127 MobiDBLite consensus disorder prediction 17 78 - -
Ssu4g0814 127 MobiDBLite consensus disorder prediction 47 78 - -
Ssu4g0814 127 PANTHER PUTATIVE-RELATED 19 124 - -
Ssu4g0814 127 PANTHER - 19 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0814 Ssu-Chr4 12689490 12689873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0814 - - gmx:100805043 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0814 4 12689490 12689873 Ssu4g0814 4 12689490 12689873 ECH
Ssu7g2615 7 51641556 51641918 Ssu4g0814 4 12689490 12689873 PCT