Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0806 ATGGCTTGCTCAGCTCCCTCTGCTTCTCTCATTTCTCCCAACCCTAACATTCTCTTCTCTCCCAAATTCCCTTCTTCCCTTTCTTCCCTCTCCTTTCCTAATTCCTCCATTTCACTTTGCAAACCTTTACGCACTTCCCCcctctctccctctatttctctcaatcGTTCATCTCCTTCTTTCAACAACTTCGTTGTCAGGGCTTCAGTTGGGAACACAGCACCGGATTTTGAAGCAGAGGCTGTTTTTGATCAGGAGTTTATCAAGGTCAAGCTATCTGAATATATtggtaaaaaatatgttatccTCTTTTTCTACCCATTGGACTTCACATTTGTTTGTCCGACAGAAATCACTGCTTTCAGTGATCGGTATGCAGAGTTTGAGGAACTAGATACAGAGATATTGGGTGTTTCAGTTGATAGTGTGTTTTCGCACCTTGCATGGGTTCAAACTGATAGAAAGTCAGGTGGTCTTGGCGACTTGAAGTATCCTTTGATTTCTGATATCACCAAATCCATCTCGAAATCTTATGGTGTTCTCATTCCTGATCAGGGGATTGCGTTGAGAGGGTTGTTCATTATTGACAAGGAAGGGGTTATTCAGCATTCTACCATTAACAACCTGGCAATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTTCAGGCCTTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGCCCTGCTGGGTGGAAGCCTGGTGAGAAGTCTATGAAACCAGACCCTAAACTTAGCAAAGAGTACTTTGCTGCGGTATAG 786 0.4122 MACSAPSASLISPNPNILFSPKFPSSLSSLSFPNSSISLCKPLRTSPLSPSISLNRSSPSFNNFVVRASVGNTAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEELDTEILGVSVDSVFSHLAWVQTDRKSGGLGDLKYPLISDITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFAAV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0806 261 Pfam AhpC/TSA family 70 203 IPR000866 GO:0016209|GO:0016491
Ssu4g0806 261 Gene3D Glutaredoxin 63 261 - -
Ssu4g0806 261 SUPERFAMILY Thioredoxin-like 70 259 IPR036249 -
Ssu4g0806 261 Pfam C-terminal domain of 1-Cys peroxiredoxin 224 258 IPR019479 GO:0051920
Ssu4g0806 261 PANTHER 1-CYS PEROXIREDOXIN PER1 36 261 - -
Ssu4g0806 261 ProSiteProfiles Thioredoxin domain profile. 68 227 IPR013766 -
Ssu4g0806 261 PANTHER THIOREDOXIN PEROXIDASE 36 261 - -
Ssu4g0806 261 CDD PRX_Typ2cys 70 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0806 Ssu-Chr4 12527066 12529723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0806 K03386 - jre:109013543 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0806 4 12527066 12529723 Ssu4g0806 4 12527066 12529723 ECH