Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0798 ATGGATCCATCCCATGATGGAAGAGGACCTCCAAAAGATTCATCCATCCACCAATCCTCTTCATACATGCATGGGGATGCACAACCACCGACGATGGCACCGCCCCACACGATGTATTACCCTCCAGGAATAGGGTACCAGCCAGGTCATGGTCCACAACCCACGCCTCACCAAGGTTACCCACCAGGTTATGCCCCATACCCAAATGATCACCCTCAACCTCACGCATACCATTACCCTGCAGGCCCCTACTTTAGCACTCCACCGACCAGTCACAACAATGGTGGAGGTAAAGCCTTCGTCCGCGGCTTCATAATGTGTTCTTGTATGATATTCACGTGCCTTTTCGTTGCGACCCTTGTTATGGCGCTAGTGTTACACCCTCAACTCCCCGTTTATAAGGTTCATTCCCTGTCGGTGGCGAATTTCAACACCACTTCAACGTTGTCCGGGGATTGGAACACTAGCATCACAATTCAGAACATCAACGAGAGGCTAAATGATTTGTTTTCCGATTTTAAGGTGGATTTGTTGCACCATAATGACGTGGTGGCAGCGAGCTATGTACCCGATTTTGAGTTGGGCAAGAAAGAAGTTAAACAAATGGATGTGAAGCCCTCGTCAAATGGATTTTCGTTCCCAAAGTGGGACTTAGACGACATGGCGAAGGAACAAGCCAGTGGCTCCATCTCGTTGGCCGTGAGGATAACTTCCATGGTAGTGTTCAAGTCTAGCACAATGTCCACGAGAAGAGCGTTGGTAATAGCCATTTGCGACGGCTTGAAGGTTGTGTTTCAAAATAACACCGGCACGGGTGCGTTGGAAAATGCGGGAAGGCCCATCGGTTGCCAACTTTATATGTGA 864 0.4919 MDPSHDGRGPPKDSSIHQSSSYMHGDAQPPTMAPPHTMYYPPGIGYQPGHGPQPTPHQGYPPGYAPYPNDHPQPHAYHYPAGPYFSTPPTSHNNGGGKAFVRGFIMCSCMIFTCLFVATLVMALVLHPQLPVYKVHSLSVANFNTTSTLSGDWNTSITIQNINERLNDLFSDFKVDLLHHNDVVAASYVPDFELGKKEVKQMDVKPSSNGFSFPKWDLDDMAKEQASGSISLAVRITSMVVFKSSTMSTRRALVIAICDGLKVVFQNNTGTGALENAGRPIGCQLYM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0798 287 MobiDBLite consensus disorder prediction 1 67 - -
Ssu4g0798 287 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 42 284 - -
Ssu4g0798 287 PANTHER PROTEIN, PUTATIVE-RELATED 42 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0798 Ssu-Chr4 12403833 12404696 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0798 - - gmx:100808758 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0798 4 12403833 12404696 Ssu7g2639 7 52653136 52655699 PCT