Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0789 ATGATGTGGCTGAAATTGTGGTTGCGGACCGTTTTTCAAAACCTTGAAAATAGTCAATGCCAGAGTTCATCTCTTCCGGATTTTAAGTATTATTACCTCCTAAATGTATGGTATCGGAGTCTCTCGTATCTGTTGTTAGTGATTACATTCTCCTCTTTCATCCaggataaagaagaaaaaattgctTGTGTGATTGGTGATCGATCAACTAGCGACGTTGTTGTGAGGCTACGCACACAGGAAGGTCGAGATGACTGGCTATACTGCCACTCAGAGGTTCTTATAAAAAACTGCAAGTATTTTGCTGACCGGTTGTCTGAGAGCTGGCCAACATGTCAGATCCTGGATTCACGCAACTGTGTTGATGTCTGTTGCCAAGAGTCGAATTTTGATTACCATGTAAATCTTATACGCCTTCTCTACATTGTCATAGATGGTTCAGTTGATGATTTGTGGCATGGTGTTAGAAATGCCCTTGGCATTCTCCAGGTCGCGGTTGAGCTTGGATGCCCGCAAATTGTCACTGCCTGTGTGAACTACTTAGAAGCAGTCACTTGGGAAGAGGCCGAGGAGGAGGAGATATTGAAAATTGTACCTCGAATGGGATTACAAGCTGAGCCTATCCTAGCTAGACTTCAACCAGTTAACCAGTCAGCTATCATAAATATCTTTGTCTGTGCCATCCGCTTTGCTACATCATCCCCTCCCCCACAAATGAATGATCTTAAATCTTCTGCACAAGAGCAACTTGAGTACATGCTAACTGAAGATGATGATGCCCCTTTATTGACAGCTGATGACAACATAAAACTCGAGGTAAAAGAATGTGTAAACGGACTATTTTCCCGGTTTAACAACTCATTAATAGCTTTGTTCTGTGGTTCCACAGAATCACTCTATGAGGCTGGAAATATTCAGTTGTTTCAATCCTATTTGACTGATTTGTCATGGGTTTGTCAGATACTGAGTAAGTTGGAAATAATGAGAGGAGTTGTTGAGTATTGGTTTGATGCATCAGAAAAGATTGTCAAGGTGCTTGAGCAAAGAAGTTCTTCATCTGAAGTCCTTGAGATAAAGTTACGAGCCATTGAGGTGACATCAAAGGTTTTAGAGGCAATTGGGTATGGTACTGTTATATTGCCAACTGCTAAACGCCTTCAGGTTTTGAAAGTGTGGCTTCCATTTGTGAGGGTTACAAAACCATTGATTGATTCTGTCACAATGAATTGTGAGAATGCCATGCTGCTTAAAATAGATGGCGAAATGTGGCAATCCTTAGAATCCACATTTGTCTCTATCATTCTTGCATTGCCATCAGGGGATCAGGCAGAGGTTTTAACTGAGTGGCTGGATAATGAGTATATGCAGTATCCAGACCTAACTGAGGCATTTGAAGCATGGTGTTATAGGTCCAAGGTTGCTAAGAGAAGATTATCATTGCTAGGGGATGAGCATGCCATGACCAACTCATTTTGA 1476 0.4112 MMWLKLWLRTVFQNLENSQCQSSSLPDFKYYYLLNVWYRSLSYLLLVITFSSFIQDKEEKIACVIGDRSTSDVVVRLRTQEGRDDWLYCHSEVLIKNCKYFADRLSESWPTCQILDSRNCVDVCCQESNFDYHVNLIRLLYIVIDGSVDDLWHGVRNALGILQVAVELGCPQIVTACVNYLEAVTWEEAEEEEILKIVPRMGLQAEPILARLQPVNQSAIINIFVCAIRFATSSPPPQMNDLKSSAQEQLEYMLTEDDDAPLLTADDNIKLEVKECVNGLFSRFNNSLIALFCGSTESLYEAGNIQLFQSYLTDLSWVCQILSKLEIMRGVVEYWFDASEKIVKVLEQRSSSSEVLEIKLRAIEVTSKVLEAIGYGTVILPTAKRLQVLKVWLPFVRVTKPLIDSVTMNCENAMLLKIDGEMWQSLESTFVSIILALPSGDQAEVLTEWLDNEYMQYPDLTEAFEAWCYRSKVAKRRLSLLGDEHAMTNSF 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0789 491 SUPERFAMILY POZ domain 50 181 IPR011333 -
Ssu4g0789 491 Gene3D Potassium Channel Kv1.1; Chain A 58 204 IPR011333 -
Ssu4g0789 491 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 57 488 IPR038920 -
Ssu4g0789 491 PANTHER OS07G0668800 PROTEIN 57 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0789 Ssu-Chr4 12172844 12174319 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0789 - - gmx:100797958 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0789 4 12172844 12174319 Ssu4g0789 4 12172844 12174319 ECH