Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0769 atggttatatttaacaaagaacacatgttatattttattttatttttaaaaccaaaaaatacacCTTTGCATTTCTATTTGCCATTGATTTCAGCAAAAATGGAATCTGATGCACTGACATGGGGAGACAAACTCATACTGAGGGGACTGTCATTCCATGGTTTTCATGGAGCAAAGCCCGAAGAAAGGACGCTGGGCCAGAAGTTCTTGGTAGATATAGATGCTTGGATGGATCTCAAAGCAGCTGGCAAATCTGATCACTTACCAGATACAGTTAgctacacacaaatatataaTATAGCTAAGGAAGTTCTTGAAGGGTCACCTCACAACCTTCTGGAGTCTGTGGCCCATAAAATTGCAATCACTACTCTGACAAATCATAAACAAATATCTGCTGTTCGAGTGAAGGTTGGAAAGCCCCATGTGGCAGTTCGGGGTCCAGTTGACTACTTAGGCGTTGAGATACTTCGACGCAGAAGCGATTTGTGA 492 0.3699 MVIFNKEHMLYFILFLKPKNTPLHFYLPLISAKMESDALTWGDKLILRGLSFHGFHGAKPEERTLGQKFLVDIDAWMDLKAAGKSDHLPDTVSYTQIYNIAKEVLEGSPHNLLESVAHKIAITTLTNHKQISAVRVKVGKPHVAVRGPVDYLGVEILRRRSDL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0769 163 Pfam Dihydroneopterin aldolase 46 156 IPR006157 GO:0004150|GO:0006760
Ssu4g0769 163 PANTHER DIHYDRONEOPTERIN ALDOLASE 1-RELATED 38 161 IPR006156 GO:0004150|GO:0006760
Ssu4g0769 163 CDD DHNA_DHNTPE 43 159 IPR006157 GO:0004150|GO:0006760
Ssu4g0769 163 PANTHER 7,8-DIHYDRONEOPTERIN ALDOLASE 38 161 - -
Ssu4g0769 163 Gene3D - 42 162 IPR043133 -
Ssu4g0769 163 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 43 160 - -
Ssu4g0769 163 TIGRFAM folB_dom: FolB domain 43 160 IPR006157 GO:0004150|GO:0006760
Ssu4g0769 163 TIGRFAM folB: dihydroneopterin aldolase 43 157 IPR006156 GO:0004150|GO:0006760
Ssu4g0769 163 SMART FolB_2 45 158 IPR006157 GO:0004150|GO:0006760
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0769 Ssu-Chr4 11881367 11881983 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0769 K01633 - gmx:100527653 244.588