Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0747 ATGGTGAGAACAAAGCAGAGGCGCACAGGAAAAGTTCCTGGTAAAAAAAGTGGTACTTCTTCACATTGCCGTATTGATTCTCTAAACTGTGATAATCAGCATGAGGATAGTGATTGGATTATAGTGAAAAAGCAGAGAGTCATCATTCTGGTGCCTGCTGCTCCTCGCAATGAAAGATCACTAACATCAAACCAAGGACCAAATCACATGCATCTTTTGCCACCTGAAATGGCAAGTAACCATGTGCAACTTCCCATGGAGACATCTGTTATACATCCTTCAGGTAATGAACGTGAGAAGAACACTTTATTAGCTGTTCAAAAGGAGACTCGTGCCGAGAGAAGAGGAGCTCCTAACTTACCTAAACCAACTGTAGTGAATCCACCATCTTTAGATCAAAGAACAGAATCAGAAAGTCCACATCAAATGAATAGTTTGAAGTCACATAAACTACTTGGAatttctgatacatcaaaagttATCAAGCAGCCCAGAACACTACTTGCACCAAGAAGGTCCTCCAACCTGGAaactttgaataaaaatttgagagCATCAAATCTTGAGAGAAAGCTTGAAAGAGCTGGTGGAGTGACCAAGTGGCTGACATCACTAGGACTGGGGCAGTTTGTGAGAATTTTTCAGGGGAAAAGTCTCAGTAAGTATCAGCTGGTAAATCTAACCATGAAAAAACTCAAGGATATGGGCGCCAGTGCAGTAGGACCTCGCAGGAAACTGATCCATGCCATTGACTGTGTTTGTCAGCCATATTGCTTTGAGGCGTTGTAA 789 0.4056 MVRTKQRRTGKVPGKKSGTSSHCRIDSLNCDNQHEDSDWIIVKKQRVIILVPAAPRNERSLTSNQGPNHMHLLPPEMASNHVQLPMETSVIHPSGNEREKNTLLAVQKETRAERRGAPNLPKPTVVNPPSLDQRTESESPHQMNSLKSHKLLGISDTSKVIKQPRTLLAPRRSSNLETLNKNLRASNLERKLERAGGVTKWLTSLGLGQFVRIFQGKSLSKYQLVNLTMKKLKDMGASAVGPRRKLIHAIDCVCQPYCFEAL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0747 262 SMART SAM_4 190 256 IPR001660 GO:0005515
Ssu4g0747 262 PANTHER F26K24.15 PROTEIN-RELATED 1 261 - -
Ssu4g0747 262 ProSiteProfiles SAM domain profile. 198 256 IPR001660 GO:0005515
Ssu4g0747 262 PANTHER SCP160 1 261 - -
Ssu4g0747 262 Pfam SAM domain (Sterile alpha motif) 197 252 IPR001660 GO:0005515
Ssu4g0747 262 MobiDBLite consensus disorder prediction 110 145 - -
Ssu4g0747 262 MobiDBLite consensus disorder prediction 126 145 - -
Ssu4g0747 262 SUPERFAMILY SAM/Pointed domain 196 255 IPR013761 -
Ssu4g0747 262 MobiDBLite consensus disorder prediction 1 23 - -
Ssu4g0747 262 Gene3D - 187 255 IPR013761 -
Ssu4g0747 262 CDD SAM_superfamily 198 252 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0747 - - gmx:100804141 461.07