Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0746 ATGGGGCAGGACACAAAAAACAGCATCGCATCCCCTCTGCTGGAACCTGCGCCTTCAGAAAGAGCTTCGAAGCTTCAAACGTTGGGAAACATCATAGTCACTGTGGTCGGAACTGGGGTTTTGGGATTGCCCTTTGCTTTTCGGATCGCTGGCTGGCTCGCTGGATCGCTTGGGGTTGCTATCGTCGGCATATCCACATACTACTGCATGCTCTTACTTGTTATGTGCAGAGAAAAATTGGCATCAGAAGAACCATTAAGGGAAGCAAGAACATACGGAGACTTGGGTTATAGGTCCTTTGGAACCCTAGGTCGGTATGTGACAGAAGTTATAATTGTGGTAGCACAATGTGCAGGGTCTGTtgcttattttgtatttattggaCAGAACCTTTATTCTGTATTCCAAGAAAATGGACTATCATTGGCCTCCTTCATATTTATGTTAGTTCCAGTTGAGATTGGATTGTCTTGGATAGGGACCTTATCTGCTTTGGCTCCTTTTAGCATGTTTGCTGATGTGTGCAATGTCATAGCTATGGGAATTGTGGTGAAGGAAGATATTCAACGGGCCTTAGGGGGGGGATTTTCATTTAGACAAAGGACAACAATCACATCCAACATTGGGGGGTTGCCATTTGCAGCAGGCATGgctgttttttgttttgaggGGTTTGGAATGACGCTGGCCCTAGAGAATTCGATGCAGGATAGACGTAAATTTCCAATATTGCTGGCTCAGACTTTTGGTGGGATAACACTCGTGTACATTCTTTTTGGGTTTTGCGGTTACATGGCTTTTGGTGAAGAAACTAGAGACATTGTAACCCTCAATCTCCCTAGAAATTGGTCATCTCTTGCAGTACAGgTAGGATTATGTGTGGGGCTTGCATTCACACTCCCAATCATGTTACACCCAATTAATGAGATTGTGGAAGGGAAACTCAAAATGATGCACAGAAACAATAATGATTCAACGGGACTAGGAAATGTTGGCATATATATTAGCCGTGCGATTGTGGTGGTTGGACTGGCAGTCATAGCTTCATTCATACCTGAATTTGGTGTATTTGCCTCATTTGTGGGGAGTACCTTATGTGCAATGCTCTCATTTGTTTTGCCAGCCACATTTCACCTAAAGCTATTTGGCTCTTCTCTACCCATCTGGCAAAAAACCTTGGATTCTATTGTATTATTGTCTGGATTATTTTTCGCTGTTTATGGCACTTACAACACAATAGTTGGAGTTTGA 1251 0.4221 MGQDTKNSIASPLLEPAPSERASKLQTLGNIIVTVVGTGVLGLPFAFRIAGWLAGSLGVAIVGISTYYCMLLLVMCREKLASEEPLREARTYGDLGYRSFGTLGRYVTEVIIVVAQCAGSVAYFVFIGQNLYSVFQENGLSLASFIFMLVPVEIGLSWIGTLSALAPFSMFADVCNVIAMGIVVKEDIQRALGGGFSFRQRTTITSNIGGLPFAAGMAVFCFEGFGMTLALENSMQDRRKFPILLAQTFGGITLVYILFGFCGYMAFGEETRDIVTLNLPRNWSSLAVQVGLCVGLAFTLPIMLHPINEIVEGKLKMMHRNNNDSTGLGNVGIYISRAIVVVGLAVIASFIPEFGVFASFVGSTLCAMLSFVLPATFHLKLFGSSLPIWQKTLDSIVLLSGLFFAVYGTYNTIVGV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0746 416 PANTHER BNAA05G27230D PROTEIN 9 415 - -
Ssu4g0746 416 Pfam Transmembrane amino acid transporter protein 22 413 IPR013057 -
Ssu4g0746 416 PANTHER AMINO ACID TRANSPORTER 9 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0746 Ssu-Chr4 11508169 11510844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0746 12 416 Organic Solute Cotransporters AT3G11900 63.549 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0746 K14209 - gmx:100305659 736.487