Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0745 ATGGAACGTCAAGGTCACGATTATGCAGCTGCATCTGCTATGGCCTATGCTCAGCAACAGCGACAAGCTGCTAATATGCAACAACAACAGCAGTTTGGATTTCATCCCCAGCATCAGCAGTTTCCTTCATCAATGCATGGTCCTCCTTTTATACCTCCAGGACCTGGTCCTGCACACCCCCCTGTGCAACAGTTCCCTTATCATCATGCCctgcagcagcagcagcagccaCTTCCACAATTACACCCTCATGCCCCTCCCCCacctcatcttcttcttcagCAGCAGCACCAGGGACCACCTGCATTCCCTTCGCATTATCCTCCTCCTCTTGTTCCATCTCCGTTTTATGATTCTGCTCCACCCCCGGTTGCTCCCCCATCTGATCCTGAGCTCCACAAGCGAATTGACAAACTTGTTGAGTATGCTGTGAAAAATGGCCCCGACTTTGAAGCTATGATATGTGAAAAACAACGGGATAATCCTTCCTATAGTTTCCTCTTTGGTGGGGAAGGCCATAGTTACTACCGATATAAGCTTTGGTTATCAACTCGTCCCCCAGGTGGTCCATTCAACCCCCCTTTTCCATCATCCTCCATGCCCATGATCCATCCTCCTCCAAATCCAATGATGAATCCGTCTCCTCTAAATGCTTCTCCAATGAATCCTGCAGGAATTGGTTCTTCACCTTCAATGCTAGGTCCACCTCCTTTCCAACAGTTCTATGATCAACAACACCACCATCAACATCCTCAGTCTTTTGGGCTTCCTGGCCGGCCCGAGTATGATCAGTCATCTAAGTCTTTCAAAGGGCTCTCTGGGCCACTTCCATCTGATGTTGCAGTGGAGCTCAGTAATGTTCTTAACAATCTGAATGGTACAAAAGAATCCATCAAAGGTGCAAAACTTTGGTTCATGCAGAGATCTCCATTTGCACCAGCCCTAGCAGAGGCTCTTAGAGATAGGGTCTTTGCATTGGATGAAGTTGAGAGACAGTTACACATAATATACCTTGCCAATGACATCCTTTTTGACAGCTTAAACCGGAGGACGAGCAGTAATGACCTTGACAGTGAAGCTCTTGCCTTGAAACCGGTTTTAGGCTCCATGCTTGCAAGAATTTATCATAACCCACAAAGCAATGAGGAATACAGGAAAAGATTGCAGCAAATGGTGGAGTTCTGGGCTTCTAAAAGGGTATACGATCAAGAAACTATATCTTCACTGAAGGGTGAGATGATTGGTGGACCACAAACAAATCCTTTTCCCGGGGCTTTGAAGGATTTATCCTCTGCTTCAGCAGAATCAGTTGCAGGAATCCTGCAGACCCCTAACCATGTTGCCCAGCAGTGGCAAGCTGATAGGTTAGGCTCTGGTTCAAGTGTCTTAGATCAAGATCGTCCTGATAAACATGTAGCTCCAGCACAGTCACTATCAGCACCCCTAGCAGCTCAGCAGTTTCTTCCAAATTCTGCTCCTCCTACTGTCTTTCCTGGGTCCATGGCTATACCATCTTCTGTTCAACCAGCTAACCAAGCACCTGGTGCTCATTTGTTACCCCCTCCATCATCCAGCACCAGCGAACAATTGCCACCATATCCATTATTCCCGCCTGGCCTCATTCCTGGAATGGTTAGAAAGATGCAGATCGGTAGTGGGGTCCCATATTCTCCTTTGAGCCCTTTGGATATCCCAACTGTTATACCGCCATCAACTGTACCGCCATCAGAAATTCTTCAAAGTgtgtcaaaattttttaaagaaattggaGAGGTTAATCCTTCTGAGGGCCCTATGAATTCTGATTCAagagatgaagatgatgaatatGATAGAGAATATGAGAGGGAGCCTCCAGTACGAAAGGGAGGTGCTTGCATACCTCCACCCCCAAACTTGCAGGTTGATCCAGAGACAGGGACCTATGCTGATGGGAGTGTAGAACGGAAACCAGGATCCAGTGGCTCGGGCAGGTTGGGGCTTGGGGCCACGGCCAACCCCAATGAGGTGAGTCAGTATGATGATGTATATACATCTTACAGGAAGCAGAGAAGCACCACTTACCATTCATCAATGAGTGCTAGAGCCGCAGCGAGATGA 2100 0.459 MERQGHDYAAASAMAYAQQQRQAANMQQQQQFGFHPQHQQFPSSMHGPPFIPPGPGPAHPPVQQFPYHHALQQQQQPLPQLHPHAPPPPHLLLQQQHQGPPAFPSHYPPPLVPSPFYDSAPPPVAPPSDPELHKRIDKLVEYAVKNGPDFEAMICEKQRDNPSYSFLFGGEGHSYYRYKLWLSTRPPGGPFNPPFPSSSMPMIHPPPNPMMNPSPLNASPMNPAGIGSSPSMLGPPPFQQFYDQQHHHQHPQSFGLPGRPEYDQSSKSFKGLSGPLPSDVAVELSNVLNNLNGTKESIKGAKLWFMQRSPFAPALAEALRDRVFALDEVERQLHIIYLANDILFDSLNRRTSSNDLDSEALALKPVLGSMLARIYHNPQSNEEYRKRLQQMVEFWASKRVYDQETISSLKGEMIGGPQTNPFPGALKDLSSASAESVAGILQTPNHVAQQWQADRLGSGSSVLDQDRPDKHVAPAQSLSAPLAAQQFLPNSAPPTVFPGSMAIPSSVQPANQAPGAHLLPPPSSSTSEQLPPYPLFPPGLIPGMVRKMQIGSGVPYSPLSPLDIPTVIPPSTVPPSEILQSVSKFFKEIGEVNPSEGPMNSDSRDEDDEYDREYEREPPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSGRLGLGATANPNEVSQYDDVYTSYRKQRSTTYHSSMSARAAAR 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0745 699 SMART surpneu2 133 185 IPR000061 GO:0003723|GO:0006396
Ssu4g0745 699 MobiDBLite consensus disorder prediction 591 671 - -
Ssu4g0745 699 MobiDBLite consensus disorder prediction 501 524 - -
Ssu4g0745 699 SMART 558neu5 283 414 IPR006569 -
Ssu4g0745 699 MobiDBLite consensus disorder prediction 1 107 - -
Ssu4g0745 699 MobiDBLite consensus disorder prediction 242 273 - -
Ssu4g0745 699 Pfam CID domain 284 409 IPR006569 -
Ssu4g0745 699 Gene3D - 281 415 IPR008942 -
Ssu4g0745 699 MobiDBLite consensus disorder prediction 80 94 - -
Ssu4g0745 699 MobiDBLite consensus disorder prediction 46 62 - -
Ssu4g0745 699 MobiDBLite consensus disorder prediction 15 44 - -
Ssu4g0745 699 Pfam Surp module 136 181 IPR000061 GO:0003723|GO:0006396
Ssu4g0745 699 ProSiteProfiles SURP motif repeat profile. 135 179 IPR000061 GO:0003723|GO:0006396
Ssu4g0745 699 Gene3D Surp module 120 185 IPR035967 GO:0003723|GO:0006396
Ssu4g0745 699 ProSiteProfiles CID domain profile. 276 417 IPR006569 -
Ssu4g0745 699 SUPERFAMILY Surp module (SWAP domain) 107 182 IPR035967 GO:0003723|GO:0006396
Ssu4g0745 699 MobiDBLite consensus disorder prediction 499 530 - -
Ssu4g0745 699 PANTHER SR-RELATED CTD ASSOCIATED FACTOR 6 125 697 IPR039037 GO:0006874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0745 - - gmx:100816468 1035.79