Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0722 atggaggCTGAGGGTGCAGCAGTGTGGCAAGGTGCGGTTTTAGGTGGAATACTCTTCTGGCTTCTCTCTGCTTCATATCTCAACGTTACTCGCAAACTTAGATCTTTCTTCCAACCTTGGGTTTCTCGTCACGTTGAACTGAAACCCCTATTATCCTTCAGATCCAGTTACGGGTTTGGGTTCCTGGATGCACTTTTCTCTTTATTGTCTTGCGTTGTCTCTGTGCCCTTTTACACTGCCTTTCTCCCTCTGCTGTTCTGGAGTGGTCATGGCAAATTGGCGAGGCAGATGACGTTGTTGATGGCGTTTTGTGATTATATTGGTAACTGCATAAAGGATGTGGTTTCAGCTCCAAGACCTGCTTCTCCACCTGTCAAGAGAGTAACTGCCACAAAAGATGAAGAAGATAATGCGTTAGAACATGGATTGCCTTCTTCTCACACACTTAACACAGTTTGCTTATctggCTACCTTTTGCACTATGTCCTGATTCATACTCAAATTCAAGGTGCCTATGCTACTTATCTTGGAGTTTCTCTTGTCTGCGTGCTGGTGTTTCTCATTGGTTTGGGAAGAATTTATCTTGGCATGCATAGTGTGGTTGATGTTCTTGCTGGCCTTCTTATTGGACTTGTGGTCCTTGCATTTTGGCTTATGGTTGATGAATACGTAGACAGTTTTGTGATCTCAGGACAAAATGTTACATCCTTTTGGGCTGCCTTGAGCTTCCTCTTGCTTTTTGCCTATCCAACTCCTGAACTTCCAACTCCAAGCTTTGAGTTTCACACTGCTTTCAATGGTGTTGCATTGGGAATTGTCACCGGAGTACAGCAAACATACCATCAATTTCACCATGGCAACGTTCCTCGTTTGTTCTCTTCAGAACTGACCATACCTGTATTTGTGGGAAGGATGCTCTTGGGCATACCTACAATACTAATTGTGAAATTCTGCAGTAAGGCTCTCGCAAAATGGACTATTCCTGTGGTAGCTAACACCTTGGGCATCCCAATAAAATCAACCAGCTATATCCCCACATTGAATGGGTCTGTGACGGGGAAAAAGTCCGATAAGCTTAAACAAGGTTACATGCAAAAGCTCCTTTCCCAGCATAAGGCATTCGATGTTGATACCGGAATTAGATTTATTCAGTATGCAGGCCTAGCGTGGTCTGTAGTTGACCTAGTGCCATCTCTTTTTTCATACATGAGCTTGTAA 1218 0.4327 MEAEGAAVWQGAVLGGILFWLLSASYLNVTRKLRSFFQPWVSRHVELKPLLSFRSSYGFGFLDALFSLLSCVVSVPFYTAFLPLLFWSGHGKLARQMTLLMAFCDYIGNCIKDVVSAPRPASPPVKRVTATKDEEDNALEHGLPSSHTLNTVCLSGYLLHYVLIHTQIQGAYATYLGVSLVCVLVFLIGLGRIYLGMHSVVDVLAGLLIGLVVLAFWLMVDEYVDSFVISGQNVTSFWAALSFLLLFAYPTPELPTPSFEFHTAFNGVALGIVTGVQQTYHQFHHGNVPRLFSSELTIPVFVGRMLLGIPTILIVKFCSKALAKWTIPVVANTLGIPIKSTSYIPTLNGSVTGKKSDKLKQGYMQKLLSQHKAFDVDTGIRFIQYAGLAWSVVDLVPSLFSYMSL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0722 405 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 58 223 IPR036938 -
Ssu4g0722 405 CDD PAP2_SPPase1 61 218 - -
Ssu4g0722 405 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 7 404 - -
Ssu4g0722 405 Pfam PAP2 superfamily 97 218 IPR000326 -
Ssu4g0722 405 PANTHER PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED 7 404 - -
Ssu4g0722 405 SMART acid_phosph_2 94 218 IPR000326 -
Ssu4g0722 405 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 8 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0722 Ssu-Chr4 11239982 11244393 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0722 - - gmx:100807865 725.702