Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0721 ATGGGTCGTCTTGCCACATTATCAGAAGAACCCATCAACGAGCAAGAGAAGAAAATCACGTCCTCGAAGAAATGGCGCAACTGGAACTGGATCAAGACCCACTTCTTCCACAAGAAGCCCGACCTCAAGATCCTCCTCAGCGTCCTCGCCTGCCCTCTCTTCCCTGTCCCTCCCCACTCCAAACCGCAACCACCCCTCAACGAGGCCTCCTCCTCCGCTCAGTACATCATCCAACACTTCACCGCCGCCACCGGCTGCCGCAAGCTCGAGGGCACGGTCAAGAACGTGTTTGCCACCGGCAAGGTCGAAATATGGGCGGTCGATGAGGTTGGAAACGCCGGAGTTTCCGAGACAGGCTGCTTTGTCATATGGCAAATGGTCCCTGACAAGTGGCAGATTGAGTTGGTTGTCGCAGGTCACAAGGTTGTCGCCGGCAGTGATGGCACCGTCGCTTGGCGCCACACCCCTTGGCTCGGTGCACACGCCGCCAAAGGCGGCGTGCGTCCTCTTCGACGCGCCGTTCAGGGACTGGACCCTTTGGCAGTGTCTGCTGTATTCTCTGCTGCGCAATACATGGGAGAAAAGCAGATCTCAGGCAtcgattgttttgtgttaaagCTGTCAGCAGATCAGAAGGACCTGGTTGACCGCAGTGATAGCACTGCTGAGATGATCAAGCACGTTGCATTTGGTTACTTCAGCCAGAGAAATGGGCTACTAGTGCACCTAGAGGACTCTTACCTCACCCGGATCCAATCACCTGGGACACGCCCCACGTACTGGGAGACCACAATGTCAACCAAAATTGAGGATTACCGAATGGTGGATGGTGTGATGATTGCACATGCTGGCCATTCAACCGTGATCATCACCAGGTTTGGGGACAATCTAAAGGCAGGCCCTGCCATCACACGGTTGGAAGAATCGTGGACCATTGATGATGTTGCATTCAATGTCCCGGGCCTATCCATGGACTGCTTCATACCCCCCAAGGAACTTCACAAAGACTATCCACAGGAAGATCTAGATTGGAGATCACCCTTGCATAGATGA 1053 0.5356 MGRLATLSEEPINEQEKKITSSKKWRNWNWIKTHFFHKKPDLKILLSVLACPLFPVPPHSKPQPPLNEASSSAQYIIQHFTAATGCRKLEGTVKNVFATGKVEIWAVDEVGNAGVSETGCFVIWQMVPDKWQIELVVAGHKVVAGSDGTVAWRHTPWLGAHAAKGGVRPLRRAVQGLDPLAVSAVFSAAQYMGEKQISGIDCFVLKLSADQKDLVDRSDSTAEMIKHVAFGYFSQRNGLLVHLEDSYLTRIQSPGTRPTYWETTMSTKIEDYRMVDGVMIAHAGHSTVIITRFGDNLKAGPAITRLEESWTIDDVAFNVPGLSMDCFIPPKELHKDYPQEDLDWRSPLHR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0721 350 PANTHER GB|AAD30234.1 2 340 - -
Ssu4g0721 350 Pfam Protein of unknown function (DUF620) 107 330 IPR006873 -
Ssu4g0721 350 PANTHER LIPASE 2 340 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0721 Ssu-Chr4 11223421 11225832 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0721 - - gmx:100800778 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0721 4 11223421 11225832 Ssu4g0721 4 11223421 11225832 ECH
Ssu4g0721 4 11223421 11225832 Ssu7g2709 7 54625026 54627993 PCT