Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0704 ATGGCTTCCTTGTGGTCATTCTGGGCAATGTTGATGGCCTTGTTGGCATGCGATTGTTCATTAGCCTCGGCTTCTAATTCTCAACAATGTGTGCAAGTTCCCACCATTTCAGCAGCACCAGCAAGTGCCCCTCTAGTTTCGCCTACTCAATCACCAGACATTGAGCCACTGTTTCCTACCCCTGTTGCAGGTGGAGTTTCTCATGCCCCATCATATTCCTCACTGCCCACAATTCCTTCAAGCCCGAGCCCTCCCAACCCAGATGCCTTGGGCACTCCATACACTGTATTGGCTTTTTTACCATCTGAGGCTCCTGCTTTCCAGTATACATATCAGCCCTTATATTCAATTTCATGTCTGACTTTACCTGTAATTTTCATAATGTGGCTTCATGTCTTGTGA 402 0.4701 MASLWSFWAMLMALLACDCSLASASNSQQCVQVPTISAAPASAPLVSPTQSPDIEPLFPTPVAGGVSHAPSYSSLPTIPSSPSPPNPDALGTPYTVLAFLPSEAPAFQYTYQPLYSISCLTLPVIFIMWLHVL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0704 133 MobiDBLite consensus disorder prediction 68 87 - -
Ssu4g0704 133 PANTHER CLASSICAL ARABINOGALACTAN PROTEIN 26 1 122 - -
Ssu4g0704 133 PANTHER CLASSICAL ARABINOGALACTAN PROTEIN 26 1 122 IPR039346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0704 Ssu-Chr4 10986556 10986957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0704 - - pvu:PHAVU_001G202300g 170.629