Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0699 ATGGGCCGGAGGGAAAGTCCACAACGAAATCTTCGCTGCAAATTGCTAGGGTTTGCAATTTGTTCATCGTTGTTCCCTCAATTTGCTCTGGAGAACCTCCATCTTCCGACGATGAAGAAGAATGAGGAACGCAGCGATAACCACAACAAGGAGAAGAAGCACataatgatgaagaagaagaacattTCGAGGTTGGGAGGAAGTGGCCTTTCGCTCGACGCTTTCGCCAATGCAAAATCCAAGAACAATCACTACAACCCAGCTCTCATAAAGAAGCAAAGGGAATTATACAAAAATGCTAAGAATGTGAATAAGTTTAAGAAGTTGTTAAAGCAGCAAAACCAGCAGAATGATCCCTCCTTGGCTCAGAGACTTATAGAgAACGTAAATGAAACTGAAGAGTGCAAGGACAAGCAtgagaggaggaagaagaagaatggtGCCCTTAGTTTGGAAGAATTGTACAAGAAACAGcatgaagagaaagagaatgaaagaatgGAGAGAGAGGCAGTCCTTAGGGTaaagaaggaagagagagaacaGGCTGAAGCTCGGAGAAAGGCTATGCGGGAAAAAATGCTTAAGAAGACACGAAAAGGGCAGCCTGTTATGAAATACAGAATTGAGCATCTTTTGGAGACTATTCAAGCTTCAACTAAAAATGCAGCTGACAGTAAATCCTGA 687 0.3741 MGRRESPQRNLRCKLLGFAICSSLFPQFALENLHLPTMKKNEERSDNHNKEKKHIMMKKKNISRLGGSGLSLDAFANAKSKNNHYNPALIKKQRELYKNAKNVNKFKKLLKQQNQQNDPSLAQRLIENVNETEECKDKHERRKKKNGALSLEELYKKQHEEKENERMEREAVLRVKKEEREQAEARRKAMREKMLKKTRKGQPVMKYRIEHLLETIQASTKNAADSKS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0699 228 Coils Coil 173 200 - -
Ssu4g0699 228 PANTHER UNCHARACTERIZED 38 221 IPR013730 -
Ssu4g0699 228 Coils Coil 122 142 - -
Ssu4g0699 228 Pfam rRNA processing 89 218 IPR013730 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0699 Ssu-Chr4 10917406 10921106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0699 - - ccaj:109797341 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0699 4 10917406 10921106 Ssu4g0699 4 10917406 10921106 ECH