Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0693 ATGGCTAAAGGCGAGGAGCGTATTGAGCTTAAATTCCGCATATACGATGGAACTGATATAGCACACAGTACTTATTCATCATCTACGATAGTTGGTACCCTTAAGCAAAAGCTAGTTTCTGAGTGGCCTAAAGGCAAAACAGTTACACCAAAGTCAGTAAGTGACCTAAAACTGATACATGCCGGTAAAGTTTTGGAAAATAGTAAAACTCTTGCTGATTCAAGAATAACGTTTGGTGACATCTCTGGGGGTGCTGTTACCATGCATGTTGTAGTACAACCTCCAGTAACTAAAAAGAAAACAGAGAAGAATCAGGAGGACAAGCAAAAGATGAATTCATGTTCATGCACTATCCTTTAG 360 0.3944 MAKGEERIELKFRIYDGTDIAHSTYSSSTIVGTLKQKLVSEWPKGKTVTPKSVSDLKLIHAGKVLENSKTLADSRITFGDISGGAVTMHVVVQPPVTKKKTEKNQEDKQKMNSCSCTIL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0693 119 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 119 IPR040015 -
Ssu4g0693 119 ProSiteProfiles Ubiquitin domain profile. 8 76 IPR000626 GO:0005515
Ssu4g0693 119 SUPERFAMILY Ubiquitin-like 4 98 IPR029071 -
Ssu4g0693 119 CDD Ubl_MUBs_plant 8 95 - -
Ssu4g0693 119 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 117 IPR039540 -
Ssu4g0693 119 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 119 - -
Ssu4g0693 119 PIRSF MUB 1 119 IPR017000 -
Ssu4g0693 119 MobiDBLite consensus disorder prediction 96 119 - -
Ssu4g0693 119 Gene3D - 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0693 Ssu-Chr4 10852462 10854887 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0693 - - gmx:100818909 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0693 4 10852462 10854887 Ssu4g0693 4 10852462 10854887 ECH