Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0690 ATGGAGGATACCCAAGAAATTGAGGAGCAGGCACGTGAAGAAGTGATTTCAGATAAAACATCTGAGAAGAAGCAGGAAACTCTTGATGAAATTCTTTCACGGCACAGGAAAGAGATATCACAggtgcagaaaaaggaagttgaGATGAAAAAGGCTGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTGCTAAGCTTAAGGAGAAACATGCCAAAGAACTGGCTGCATTAGGCTATAGCAGTGGTAATGGAAATGAAAAAAGCAATTTGGACAGTTTGGTGAAGGCCATAGCTGGAGTATCTGTTTCTAGTCAACCTGAACAAACAAAGGTCAGCAAGGCCAAACAGAGGCGAGACAAAAGAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATCCAAGCAGAGCAAAGTGATATTGTAAGTGATCGTATGATTGAAAACGATAAATTGGAAAGGAAGTTGAAGCCTCTTGGTTTGACTGTTTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCTGTTGAGGATCAGCTGGCCCTCCTTTCTCGGGGTAGATCTCCTTATACATACCAAGAACTTCGAGAAATGGTGGCTACTTACATGAGAAAGCATACATCTGATTTCCTTCCATTTTTCCTGTCCGAGAATTTAATTGAAGATGATTCTGATGAATCACTTGCTcagaagtttgaaaattattgtaaaGAAGTGGAGTCCACAGCTATATGGGGGGGACAACTAGAGCTTGGTGCCTTGACTCACTGCTTGAAGAAgcatattatgatattttcaGGGTCCTTCCCAGATGTGGAGATGGGCAAAGAGTATAAATCCGATGATGGCACCGGCTTGTCTAAGTCGAGTATCATGCTTTCTTATCATAAGCATGCTTTTGGGCTAGGAGAGCATTATAATTCTGTGGTCCCATCATGA 975 0.4062 MEDTQEIEEQAREEVISDKTSEKKQETLDEILSRHRKEISQVQKKEVEMKKAAARGSKAEQKAKKKQVEEEVSQLSAKLKEKHAKELAALGYSSGNGNEKSNLDSLVKAIAGVSVSSQPEQTKVSKAKQRRDKRAQQEAEREQRIQAEQSDIVSDRMIENDKLERKLKPLGLTVCEIKPDGHCLYRAVEDQLALLSRGRSPYTYQELREMVATYMRKHTSDFLPFFLSENLIEDDSDESLAQKFENYCKEVESTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDDGTGLSKSSIMLSYHKHAFGLGEHYNSVVPS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0690 324 MobiDBLite consensus disorder prediction 10 25 - -
Ssu4g0690 324 ProSiteProfiles OTU domain profile. 172 324 IPR003323 -
Ssu4g0690 324 MobiDBLite consensus disorder prediction 124 152 - -
Ssu4g0690 324 MobiDBLite consensus disorder prediction 1 25 - -
Ssu4g0690 324 MobiDBLite consensus disorder prediction 42 69 - -
Ssu4g0690 324 Coils Coil 42 85 - -
Ssu4g0690 324 PANTHER OTU DOMAIN CONTAINING PROTEIN 24 323 - -
Ssu4g0690 324 MobiDBLite consensus disorder prediction 117 152 - -
Ssu4g0690 324 PANTHER DEUBIQUITINASE OTUD6B 24 323 - -
Ssu4g0690 324 SUPERFAMILY Cysteine proteinases 141 323 IPR038765 -
Ssu4g0690 324 Pfam OTU-like cysteine protease 178 318 IPR003323 -
Ssu4g0690 324 Gene3D - 158 323 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0690 K18342 - gmx:100780620 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0690 4 10791362 10793741 Ssu4g0690 4 10791362 10793741 ECH