Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0688 ATGGATGTGTTAACAACATTGACTGCTGACAAGCCAGTGGTGATCTTCAGCAAGAGCACTTGTTGCATGAGCCACACCGTGAAGGCTCTCATATGCAGCTTTGGTGCCAACCCTGCAGTTATTGAGGTTGACAAAATGCCAAGTGGCCAGCAAGTAGAGGGGGCACTCATCCAGCTAGGTTGCCGCCCAAGTGTGCCTGCAGTGTTCATAGGACAGCAATTCATTGGTGGTGCTGATGAAGTCATAAAACTCAACGTTCAAAACAAGCTTGCCCAATTGCTTCTCAGGGCTAAAGCTATATTTATCTGGAGTAGGTAG 318 0.478 MDVLTTLTADKPVVIFSKSTCCMSHTVKALICSFGANPAVIEVDKMPSGQQVEGALIQLGCRPSVPAVFIGQQFIGGADEVIKLNVQNKLAQLLLRAKAIFIWSR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0688 105 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Ssu4g0688 105 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Ssu4g0688 105 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Ssu4g0688 105 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Ssu4g0688 105 PANTHER GLUTAREDOXIN 1 105 IPR011905 -
Ssu4g0688 105 TIGRFAM GlrX-like_plant: glutaredoxin-like family 6 101 IPR011905 -
Ssu4g0688 105 CDD GRX_GRXh_1_2_like 12 93 - -
Ssu4g0688 105 Pfam Glutaredoxin 13 75 IPR002109 -
Ssu4g0688 105 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
Ssu4g0688 105 Gene3D Glutaredoxin 2 103 - -
Ssu4g0688 105 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0688 Ssu-Chr4 10780000 10780317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0688 1 102 Miscellaneous Gene Families AT4G15690 48.039 2.89e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0688 K03676 - gmx:100803979 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2031 7 40359242 40359550 Ssu4g0688 4 10780000 10780317 PCT