Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0684 ATGCTCCACCGCATCACCCActccacctcttcctctcttctCCTGCTTCCTCGTCTTTTATGTTTCTCTCACCATCCCTTCGCTTCCAATTTCAAattctctttctccctctcaCCAAAACCTCTCACACTCAAGGTCCTCTCCATGGCATCATCTCATTCCCACCACAAACACACAAATCGACTCGCTTCCGAACAGAGCCCTTACCTTCTCCAACACGCTCACAACCCTGTTGATTGGTATCCGTGGGGCGAAGAAGCCTTCGCCGAAGCGCGCCAACGAAACGCGCCTATCTTCTTATCAAGTAATTCTCTCCTTTTTccgtattttatttttccttttgcgAATTTCGTTTGCGTAATTAACTGCGAGGCTTTGCGTGTGGTGTTGATGGCGATTCTGTTCAAAGTTGGCTACAGCACTTGTCACTGGTGTCACGTTATGGAGGTCGAGTCTTTCGAGGACGAAGGGGTCGCCAAGTTGTTGAACGATTGGTTTGTTAGCATTaagGTGGATCGAGAGGAGCGACCAGATGTTGATAAGgtATACATGACGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCTGAGTGTGTTTCTTTCGCCTGACTTGAAACCTTTAATGGGTGGAACTTACTTTCCTCCTGATGATAAGTATGGACGACCTGGATTTAAGACTATACTTAGAAAGGTAAAAGAGGCTTGGGATAGTAAGAGGGATATGCTAATTAAGAGTGGAGCATATGCAATTGAACAGCTTTCTGAGGCAATGTCTGCTAGTTCAGATTCTGGTAAACTGACTGATGGGGTTCCAGCTGATGCTTTACGTCTATGCTCAGAGCAGCTCTCTGGGAGCTACGATTCTAAGTTTGGTGGGTTTGGATCTGCACCAAAGTTTCCCAGACCAGTGGAGATCAACTTGATGCTTTATCACTCCAAAAAGTTGGAGGATACGGGGAAGCTGGATGGAGCTAATGGAAGTCAGAAAATGGTTTTCTTTAGCTTGCAATGCATGGCTAAAGGTGGGATTCATGATCATATTGGAGGGGGCTTTCACAGATACAGTGTGGATGAGTGCTGGCACGTTCCACATTTTGAGAAGATGCTATATGATCAAGGGCAGCTTGCTAATGTTTATCTAGATGCGTTTTCTATCACAAAAGATACCTTCTATTCATATATATCACGGGATATCCTTGACTATTTAAGGAGAGATATGATTGGTCCAGAAGGTGAAATCTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGACAAGCAAAGAGGTTGAAGACATACTTGGAGAGCATGCTGCCCTTTTTGAGGAGCACTATTACATCAAACAATCCGGTAATTGTGACCTATCTGGAATGAGTGATCCTCACAATGAATTCAAGGGAAAGAATGTCCTAATTGAGAGAAAGGAACCTTCAGAAATGGCATCAAAATATGGCATGTCAGTTGAGACCTATCAAGAAATTCTTGGAGAATGCAGGCATAAGTTATTTGAAGTAAGGTCAAGGCGTCCAAAGCCACATTTGGATGATAAGGTTATTGTATCTTGGAATGGACTGGCAATCTCTTCTTTTGCTAGGGCTTCTAAGATTCTCAAGGGTGAAGCTGAAGGGACCAAATTCTACTTTCCTGTTGTTAGCACTGAATCAAAGGAGTACATGAGAATTGCAGAAAAAGCAGCATTCTTTATAAGGAATCAACTTTACGATGTGGAGACTCACAGGCTACACCATAGTTTCAGACATTCTCCGTCTAAAGCTCCTGGTTTCTTGGATGATTATGCTTTTCTGATTTCTGGATTGCTGGATCTCTATGAGTTTGGTGGTGGAATTAACTGGCTTCTATGGGCCATTGAGTTGCAGGAAACCCAGGATGCTTTGTTTCTTGATAGGGCTGGAGGTGGATATTTCAGTAATACAGGAGAAGATCCTTCCGTTCTCCTCCGCGTGAAGGAAGACCATGATGGGGCAGAACCCTCTGGAAACTCAGTTTCTGCTATAAATCTTATAAGATTGGCTTCCATGGTTGCTGGAAGTAAGGCTGAGCACTATAAGCGAAATGCAGAACATCTATTGGCAGTTTTTGAGAAAAGATTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGACATGCTACTTGTACCTTCTCGGAAGCAAGTGGTCGTGGTTGGTGAAAGGACGTCTGAGGAATTTGAAAACATGGTTGCTGCAGCTCATGCATTATATGATCCCAACAGAACAGTTATTCATATAGATCCCAACAACAAAGAAGAGATGGAATTTTGGGAAGTGAATAACAGCAAAGTTGCTCTCATGGCGAAAAATAACTATGCAGTCAACAAGGTTGTAGCTCTTGTGTGCCAAAACTTCACTTGTAGCCCCTCGGTCACTGATCATTCGTCACTTGAAGCTTTGCTCTCCAAAAAACCTTCCTCTTCGTTCACATAA 2520 0.4254 MLHRITHSTSSSLLLLPRLLCFSHHPFASNFKFSFSLSPKPLTLKVLSMASSHSHHKHTNRLASEQSPYLLQHAHNPVDWYPWGEEAFAEARQRNAPIFLSSNSLLFPYFIFPFANFVCVINCEALRVVLMAILFKVGYSTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKEAWDSKRDMLIKSGAYAIEQLSEAMSASSDSGKLTDGVPADALRLCSEQLSGSYDSKFGGFGSAPKFPRPVEINLMLYHSKKLEDTGKLDGANGSQKMVFFSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSYISRDILDYLRRDMIGPEGEIFSAEDADSAETEGAARKKEGAFYIWTSKEVEDILGEHAALFEEHYYIKQSGNCDLSGMSDPHNEFKGKNVLIERKEPSEMASKYGMSVETYQEILGECRHKLFEVRSRRPKPHLDDKVIVSWNGLAISSFARASKILKGEAEGTKFYFPVVSTESKEYMRIAEKAAFFIRNQLYDVETHRLHHSFRHSPSKAPGFLDDYAFLISGLLDLYEFGGGINWLLWAIELQETQDALFLDRAGGGYFSNTGEDPSVLLRVKEDHDGAEPSGNSVSAINLIRLASMVAGSKAEHYKRNAEHLLAVFEKRLKDMAMAVPLMCCAADMLLVPSRKQVVVVGERTSEEFENMVAAAHALYDPNRTVIHIDPNNKEEMEFWEVNNSKVALMAKNNYAVNKVVALVCQNFTCSPSVTDHSSLEALLSKKPSSSFT 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0684 839 CDD SSP411 81 238 IPR004879 -
Ssu4g0684 839 SUPERFAMILY Thioredoxin-like 58 101 IPR036249 -
Ssu4g0684 839 Pfam Protein of unknown function, DUF255 132 255 IPR004879 -
Ssu4g0684 839 Pfam Protein of unknown function, DUF255 59 101 IPR004879 -
Ssu4g0684 839 Gene3D Glutaredoxin 57 264 - -
Ssu4g0684 839 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 133 832 IPR024705 -
Ssu4g0684 839 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 49 101 IPR024705 -
Ssu4g0684 839 SUPERFAMILY Thioredoxin-like 133 236 IPR036249 -
Ssu4g0684 839 SUPERFAMILY Six-hairpin glycosidases 283 677 IPR008928 GO:0005975
Ssu4g0684 839 PIRSF UCP006402_thioredoxin 131 837 IPR024705 -
Ssu4g0684 839 PIRSF UCP006402_thioredoxin 43 103 IPR024705 -
Ssu4g0684 839 Gene3D - 565 736 IPR012341 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0684 - - gmx:100777751 1467.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0684 4 10723589 10729516 Ssu4g0684 4 10723589 10729516 ECH