Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0666 ATGGCCACCGTAATCGACGGTAAAGCCGTTGCGCAAACCATCCGATCTGAAATCGCCGACGAAGTGCGCCTGCTCTCTCAAAAATACGGCAAGGTTCCGGGATTAGCAGTGGTGATAGTAGGGAACAGAAAGGATTCGCAAAGCTATGTGGGAATGAAGAGAAAGGCGTGCGCCGAATTGGGAATCAAATCCTTCGATGTGGACCTTCCCGAGCAAGTCTCCGAAGCTGAACTAATAAAGCAAGTTCACGAATTGAATGCTAACCCTGATGTACATGGTATATTGGTTCAACTTCCGTTgcctaagcacataaatgaagagaaagttcTGACTGAAATCAGCCTTGAGAAGGATGTAGATGGATTTCATCCTTTGAACATTGGCAAGCTTGcaatgaaaggcagagaccccCTATTTCTTCCCTGCACTCCCAAGGCATGTCTTGAACTATTACAACGAAGTGGTGTTAGTATAAAGGGAAAGAAGGCAGTTGTAGTTGGGAGAAGCAACATAGTTGGATTACCAGCTTCATTGCTGCTTTTGAAAGCAGATGCTACAGTTACTATTGTCCATTCACACACAAGTCAACCAGAAAGTATCATACGTGAAGCAGATATTGTTATTGCAGCAGCAGGACAGCCAATGATGATCAAGGGCAGTTGGCTCAAACCTGGAGCTGCAGTCATAGATGTTGGCACAAATGTTGTTGATGACCCAACAAGGAAGTCTGGTTACAGGCTTGTTGGAGATGTAGATTTTGAGGAAGCATCTAAAATTGCTGGTTGGATTACTCCTGTTCCTGGTGGTGTAGGTCCAATGACAGTCACAATGTTGCTGAAGAATACTTTGGAGGGGGCCAAGCGCAAGATTGAGCAAAATAATTGA 885 0.4237 MATVIDGKAVAQTIRSEIADEVRLLSQKYGKVPGLAVVIVGNRKDSQSYVGMKRKACAELGIKSFDVDLPEQVSEAELIKQVHELNANPDVHGILVQLPLPKHINEEKVLTEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKACLELLQRSGVSIKGKKAVVVGRSNIVGLPASLLLLKADATVTIVHSHTSQPESIIREADIVIAAAGQPMMIKGSWLKPGAAVIDVGTNVVDDPTRKSGYRLVGDVDFEEASKIAGWITPVPGGVGPMTVTMLLKNTLEGAKRKIEQNN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0666 294 PANTHER BIFUNCTIONAL PROTEIN FOLD 1, MITOCHONDRIAL 2 290 - -
Ssu4g0666 294 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 IPR020630 GO:0004488
Ssu4g0666 294 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 IPR020867 GO:0003824
Ssu4g0666 294 Gene3D Leucine Dehydrogenase, chain A, domain 1 7 284 - -
Ssu4g0666 294 Hamap Bifunctional protein FolD [folD]. 2 290 IPR000672 GO:0004488
Ssu4g0666 294 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 2 290 - -
Ssu4g0666 294 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 289 IPR020631 GO:0004488
Ssu4g0666 294 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 IPR000672 GO:0004488
Ssu4g0666 294 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 IPR000672 GO:0004488
Ssu4g0666 294 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 IPR000672 GO:0004488
Ssu4g0666 294 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 IPR000672 GO:0004488
Ssu4g0666 294 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 IPR000672 GO:0004488
Ssu4g0666 294 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 IPR000672 GO:0004488
Ssu4g0666 294 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 156 176 IPR000672 GO:0004488
Ssu4g0666 294 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 1 121 IPR046346 -
Ssu4g0666 294 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 287 IPR036291 -
Ssu4g0666 294 Gene3D - 5 266 - -
Ssu4g0666 294 CDD NAD_bind_m-THF_DH_Cyclohyd 116 287 IPR020631 GO:0004488
Ssu4g0666 294 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 IPR020867 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0666 Ssu-Chr4 10486067 10488513 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0666 - - gmx:100792682 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0666 4 10486067 10488513 Ssu4g0666 4 10486067 10488513 ECH